Pairwise Alignments

Query, 243 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 267 a.a., two component transcriptional regulator, LytTR family from Sphingomonas koreensis DSMZ 15582

 Score =  105 bits (262), Expect = 9e-28
 Identities = 69/255 (27%), Positives = 127/255 (49%), Gaps = 32/255 (12%)

Query: 8   IIVDDEPLAREAMKLLIEEAECLQLVGSFNSAATASDFMEQHVVDLVFLDIQMPGITGIE 67
           I+VDDEPLA + ++L ++  E ++++    +   A   ++ H  DLVFLDIQMPG  G  
Sbjct: 6   ILVDDEPLAIQGLELRLQAHEDVEIIDKCQNGREAIRAIKTHKPDLVFLDIQMPGFDGFS 65

Query: 68  FARTIS--KRTLVIFTTAYTEYALDSYEVDAIDYLIKPVEAERF-------------QKA 112
             + +   +  L +F TAY+++A+ ++E +A+DYL+KPV+  R              ++ 
Sbjct: 66  VVQGLMEVEPPLFVFVTAYSDHAIRAFEANAMDYLMKPVDEARLADTLERVRQRLTEKRG 125

Query: 113 VEKAQSYHSLLLQEEKEAIETIVAAEYFFVKAER-----------RYFKVNFSDILFVEG 161
           VE+ +    +L +   +A E + + +   V + R           + F+V+   I  VE 
Sbjct: 126 VEEVEKLKEVLAEVAPDAAEELASGDTAEVASNRYEKLINIKDRGQIFRVDVDTIEVVEA 185

Query: 162 LKDYVILQLGEQRIITRMSLKAVFDLLPKDSFLRVNKSYIVN---TAHIDSFDNNDIFI- 217
             DY+ ++  +  ++ R ++K +   L    F RV++S IVN      +    N + F+ 
Sbjct: 186 AGDYMCIKTADNTLVLRETMKDLEKRLDPRRFQRVHRSTIVNLDQVKQVKPHTNGECFLV 245

Query: 218 --KSYEIAIGNSYRD 230
                ++ +  SYRD
Sbjct: 246 LDSGSQVKVSRSYRD 260