Pairwise Alignments

Query, 243 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 246 a.a., two component transcriptional regulator, LytTR family from Sphingomonas koreensis DSMZ 15582

 Score =  103 bits (257), Expect = 3e-27
 Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 5/228 (2%)

Query: 5   MNCIIVDDEPLAREAMKLLIEEAECLQLVGSFNSAATASDFMEQHVVDLVFLDIQMPGIT 64
           +  +IVDDEPLA E M++L      + L+G+      A   ++    DLV LDI MP   
Sbjct: 6   LRTLIVDDEPLAVERMQILCAGIPEIDLIGTAADGDAALRLIDALAPDLVLLDIAMPHRD 65

Query: 65  GIEFARTISK---RTLVIFTTAYTEYALDSYEVDAIDYLIKPVEAERFQKAVEKAQSYHS 121
           GI  A  +S+   R  VIF TA+ ++A+ +++V A+DY++KPV AER  +A+ +A     
Sbjct: 66  GIGVASALSEAAHRPAVIFCTAFEQHAVAAFDVAAVDYVLKPVSAERLARAIGRAVEAAG 125

Query: 122 LLLQEEKEAIETIVAAEYFFVKAERRYFKVNFSDILFVEGLKDYVILQLGEQRIITRMSL 181
               + + A    +  E F+V       +V+ SDI  V+  +DY+ L +G +  +   ++
Sbjct: 126 RARADPQPASSRWI--EEFWVPHRSEMVRVSASDIERVDAERDYMRLGVGGRSYLIHQTI 183

Query: 182 KAVFDLLPKDSFLRVNKSYIVNTAHIDSFDNNDIFIKSYEIAIGNSYR 229
             +   L  D F+R+++S IV    I    ++ + +   E+A G   R
Sbjct: 184 SELERRLDPDHFIRLHRSTIVRKDRIAKLRHDGLGVWHAELADGELVR 231