Pairwise Alignments

Query, 718 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 721 a.a., Outer membrane receptor proteins, mostly Fe transport from Sphingomonas koreensis DSMZ 15582

 Score = 92.8 bits (229), Expect = 5e-23
 Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 14/267 (5%)

Query: 456 VRKHFGDYSFSLGLVWTPSVQHMVKVNIGRSFRLPGANELAANGVHHGTFRHEQGDASLK 515
           V + F  +S ++GL +  + +  + +N  R+ R P   EL +NG H  T  +E G+ +  
Sbjct: 461 VDRGFDAFSGAVGLSYEVAPEVKIGINGSRAVRAPSGEELFSNGPHIATQAYEVGNPNFA 520

Query: 516 SEQGWQMDASYNLRYHGLSVSVSPFVSWFSNYIFLRPTG-----EWSVLPHAGQIYRYTG 570
            E+ W ++     R   +   +S + +WF NYI+   TG     +   LP    I++Y  
Sbjct: 521 LEKSWGLELYARGRAGPVRFQISGYANWFDNYIYENDTGTRFENDEFDLP----IFQYLQ 576

Query: 571 AEALFAGTEATIDINFLRHFNYRISGEYVYTY---NCDEHIPLSFSPPFGMRNTLTWQRK 627
           A+A + G E  I    LR  ++ +SG  V  Y         P+   PP  +   L     
Sbjct: 577 ADARYYGIEGEISATLLRAGDFSLSGNLVADYVNAELGNGSPVPRIPPLRVLGGLDASYN 636

Query: 628 HYMLYAEWQLIARQNRVDRNEDRTPGANLFHLGGSLNIPVGRTNEIEITLTARNIFNTRY 687
            +    E +   RQ+RV   E  TP   L +   + + P G   E  I L+A NIF+   
Sbjct: 637 GFGGRVEVEHSTRQSRVASFETETPAFTLVNASLTWH-PFGEKRETAIILSANNIFDVEA 695

Query: 688 YNHLSFYRKVEIPEPGRNFQLLIKIPF 714
             H SF  K  +P  GR+ ++  ++ F
Sbjct: 696 RRHASF-TKDFVPLAGRDIRVAARVSF 721



 Score = 72.4 bits (176), Expect = 7e-17
 Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 9/148 (6%)

Query: 19  HAQKSDSIKSMLL----PDVVVTESYQQRQAKKSALT-VEVIEQDFLRKHFTGNFMQAVE 73
           H ++  S +SM+      DVV+T  Y    A    L    V+  D L +   G     + 
Sbjct: 24  HQERDRSSRSMVHGDADADVVITAPYV---ADLDLLAGTSVVSGDELVRDIRGQIGDTLT 80

Query: 74  NIPGVQAMDIGSGFSKPMIRGMGFNRIAVLENGIKQ-EGQQWGADHGLELDAFNIEAVNV 132
            +PGV A     G S+P++RG    R+ VL +G+   +      DH + +D    E + V
Sbjct: 81  RVPGVSATSFSPGASRPVLRGFQGERVRVLTDGLGSLDVSNTSTDHAVTIDPLTAERIEV 140

Query: 133 LKGPSSLLYGSDAMGGVIDIASPPIPSA 160
           L+GP+ LL+GS A+GG +++    IP A
Sbjct: 141 LRGPAVLLFGSQAIGGAVNVIDRRIPRA 168