Pairwise Alignments

Query, 718 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 716 a.a., TonB-dependent receptor from Cupriavidus basilensis FW507-4G11

 Score = 94.4 bits (233), Expect = 2e-23
 Identities = 156/709 (22%), Positives = 265/709 (37%), Gaps = 70/709 (9%)

Query: 31  LPDVVVTESYQQRQAKKSALTVEVIEQDFLRKHFTGNFMQAVENIPGVQAMDIGSGFSKP 90
           L +VV+T +    +       V  +  D L           ++ +PGV +   G   S+P
Sbjct: 53  LREVVITANPLGSELTDLVAPVSTLGGDALAVRQGSTLGDTLDKLPGVSSSYFGPNASRP 112

Query: 91  MIRGMGFNRIAVLENG-IKQEGQQWGADHGLELDAFNIEAVNVLKGPSSLLYGSDAMGGV 149
           +IRG+  +RI VL+NG    +      DH + +D    E + V++GP++L+YG +A+GGV
Sbjct: 113 IIRGLDGDRIKVLQNGGTTVDASTLSNDHAVPIDPLVAERIEVVRGPAALMYGGNAIGGV 172

Query: 150 IDIASPPIPSANMLFGDVTLLGKSVNGTLAGSLMLG--LKKNAWYAQIRYSEQHFGDYRI 207
           +++    IP   +         + V G +  S   G    +NA        E   G   I
Sbjct: 173 VNVIDNRIPKEPI---------QGVGGAVDASATAGGDSARNA----SGLLEAGNGQIAI 219

Query: 208 PTDTIVYLTQ--KMPVYGRKLKNTAGVERNIGLFTQYQRKGYRADYSISNVYQKTGFFPG 265
             D     T   ++P Y R     +   RN     + + + Y      SN  Q  G   G
Sbjct: 220 HADAFARKTSDLRIPGYAR-----SASLRNSQPLPEGESEAY-GRLPNSNAQQSGGSLGG 273

Query: 266 AHGVPDASRVEDDGDSRNIELPYSKVNHLKVTTHQQ---YAWEKLILSGDL-GFQNNHRE 321
           A+   D     +  +  N E      + +++  HQQ      E   L+G+  GF  + + 
Sbjct: 274 AYTWADGFVGANYSEYHN-EYGTPAEDTVRLQMHQQRFALEGEARNLAGNTGGFIESVKG 332

Query: 322 EWSAFHTHYGSQPAPEKDPDKELAFDLNTYSASVKARFIGSSSWEHTLGWDRQHQQNDIS 381
           ++S  +T Y  +    +       F  N + A  +AR     +    +G      +    
Sbjct: 333 KFS--YTDYEHKEI--ESGQTGTIFKNNGWDARFEARHARIGNMTGVIGTQFGSTRFSAL 388

Query: 382 GYSFLLPEYHRSSTGLLWLTTYKPNNILSVSGGVRYDYGYIGISPHEDVYLADYLRRQGY 441
           G    +P     +  L           LS  G ++ + G  G   H  V      + Q  
Sbjct: 389 GEEAFVPSTDTDNAALFVFEEMP----LSAGGDLKLNLG--GRIDHTSV------KAQAN 436

Query: 442 DDEQVESYKWNSHAVRKHFGDYSFSLGLVWTPSVQHMVKVNIGRSFRLPGANELAANGVH 501
            +++            + F   S S GL++  +    +  N+  + R P   EL ANG H
Sbjct: 437 GNDRFSD-------ASRSFNAGSASAGLLYKLAPAWSLTSNLAYTERAPTFYELYANGPH 489

Query: 502 HGTFRHEQGDASLKSEQGWQMDASYNLRYHGLSVSVSPFVSWFSNYIFLRPT-------G 554
             T   EQGD +   E+   +D     +    S  +S + S F+NY+ L  T       G
Sbjct: 490 VATGSWEQGDPNANKERATSLDLGVRFKSGPHSAGLSGYYSRFANYLALTNTGTARDAQG 549

Query: 555 EWSVLPHAG--QIYRYTGAEALFAGTEATIDINFLRHF-------NYRISGEYVYTYNCD 605
           ++     AG   + +Y G  A   G EA       +         +     +YV   N +
Sbjct: 550 DFLAPGSAGALPVMQYMGVPATLYGFEAEGRARVWQKLLTGSDTVDLEARADYVRGENRN 609

Query: 606 EHIPLSFSPPFGMRNTLTWQRKHYMLYAEWQLIARQNRVDRNEDRTPGANLFHLGGSLNI 665
              PL    P  +   + +    +   A+    ARQ RV  N+  T    L  +  +   
Sbjct: 610 TGEPLPRLSPLRLGGAVVYGAGPWGARADVTYAARQTRVPSNDTPTDAYTLLGVSITYKF 669

Query: 666 PVGRTNEIEITLTARNIFNTRYYNHLSFYRKVEIPEPGRNFQLLIKIPF 714
            +  T  + + L   N+ N    +  S  R +  P  GR+ +L ++  F
Sbjct: 670 KMAGTQTL-VYLRGDNLTNQDARSATSILRDI-APLAGRSVKLGVRTTF 716