Pairwise Alignments

Query, 343 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 305 a.a., putative signal peptide protein (RefSeq) from Shewanella sp. ANA-3

 Score =  461 bits (1187), Expect = e-135
 Identities = 226/305 (74%), Positives = 259/305 (84%)

Query: 37  VEKVSFSNQYKMKVAGNLFLPKTMKEGEKYPAIIVGHPMGAVKEQSANLYATKMAERGFV 96
           ++KV+F NQYKM V GNL+LPK MK GEK  AIIVGHPMGAVKEQSA LYA ++AERGFV
Sbjct: 1   MQKVTFPNQYKMNVTGNLYLPKDMKAGEKRAAIIVGHPMGAVKEQSAVLYAQQLAERGFV 60

Query: 97  TLSIDLSFWGGSEGEPRNAVLPEVYAEDFSAAVDFLGTRPFIDRNNIGVIGICGSGSFAI 156
           TL+IDLSFWG SEG PRNAVLP++YAEDFSAAVDFLGT  F DR  IGV+GICGSGSFAI
Sbjct: 61  TLAIDLSFWGESEGNPRNAVLPDMYAEDFSAAVDFLGTSEFADRERIGVLGICGSGSFAI 120

Query: 157 SAAKIDPRLKAIATISMYNMGTASRNGLKHALTLEQRKQIMAEAAEQRYAEFLGGETKYT 216
           SAAKIDPR+KAIAT+SMY+MG  SR+    +LTL QR+Q++AEAA QRY EF GG+T+YT
Sbjct: 121 SAAKIDPRMKAIATVSMYDMGGFSRHLYGKSLTLAQRQQMIAEAAAQRYVEFSGGQTQYT 180

Query: 217 GGTVHEITENSGPIEREFYEFYRTQRGEFTPEGATLTTTTHPTLSSNVKFMNFYPFEDIE 276
           GGT HEI ENS PI +EFY+FYRT RGEFTP G++   TTHPTLSSN KFMNFYPF DIE
Sbjct: 181 GGTPHEIDENSHPIAKEFYDFYRTPRGEFTPAGSSPELTTHPTLSSNTKFMNFYPFNDIE 240

Query: 277 TISPRPMLFITGENAHSREFSEDAYRLAADPKELYIVPGAGHVDLYDRVGLIPFDKLESF 336
           +ISPRP+LF+ G+ AHS EFS++AY LAA+PKELY+V GAGHVDLYDRV LIPFDKL  F
Sbjct: 241 SISPRPLLFVAGDEAHSLEFSQEAYSLAAEPKELYLVKGAGHVDLYDRVKLIPFDKLTQF 300

Query: 337 FKEYL 341
           F +YL
Sbjct: 301 FTQYL 305