Pairwise Alignments

Query, 305 a.a., transcription regulator, AraC family (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 254 a.a., AraC-type DNA-binding domain-containing proteins from Sphingomonas koreensis DSMZ 15582

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 24/82 (29%), Positives = 52/82 (63%), Gaps = 1/82 (1%)

Query: 218 SVKYFADKVFLSANYFGDMVRKQTGKTVSEYIQDKMIELAKEQLMSSNKTMSQIAYEIGF 277
           ++  +AD + ++   F  + R++TG + +E+ Q   + +A  +L +S + ++ IAY++G+
Sbjct: 172 TIDEWADALAMNRRSFTRLFRRETGMSFAEWRQQACLSVALPKL-ASGEPVTSIAYDLGY 230

Query: 278 QYPQHLSRMFKRIVGMTPNQFR 299
             P + S MFKR++G  P+++R
Sbjct: 231 DGPGNFSTMFKRVLGAPPSRYR 252