Pairwise Alignments

Query, 386 a.a., diaminopimelate decarboxylase (EC 4.1.1.20) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 415 a.a., diaminopimelate decarboxylase from Pseudomonas stutzeri RCH2

 Score =  254 bits (648), Expect = 4e-72
 Identities = 152/364 (41%), Positives = 212/364 (58%), Gaps = 13/364 (3%)

Query: 15  TPFYYYDTKVLRDTLSAINQEVAKYPSYSVHYAVKANANPKVLTIIRESGMGADCVSGGE 74
           TP Y Y    +     A    +   P + V +AVKAN+N  VL ++   G G D VS GE
Sbjct: 27  TPTYVYSRAHIEAQYRAYADALDGMP-HLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 75  IRAAVRAGFPANKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKIAN 134
           +   + AG   ++IVF+GVGK   ++   LE G+ CFNVES  ELE + ++AA   K A 
Sbjct: 86  LERVLAAGGQPDRIVFSGVGKTRDDMRRALEVGVHCFNVESTDELERLQQVAAELGKKAP 145

Query: 135 VAFRINPDVGAHTHANITTGLAENKFGISMQDMDRVIDVALEMKNVKFIGLHFHIGSQIL 194
           V+ R+NPDV A TH  I+TGL ENKFGI + + + V   A E+ N++ +G+  HIGSQ+ 
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIDNAEAVYARAAELPNLEVVGVDCHIGSQLT 205

Query: 195 DMGDFIALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQSVPDFKSYFATYAGQ 254
            +  F+   +R+  L D+L AR I + H+++GGGLG+ Y    R   P     +     Q
Sbjct: 206 SLPPFLDALDRLLALTDRLAARGIQIRHLDLGGGLGVRY----RDEQPPLAGDYIQAVRQ 261

Query: 255 LKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTKKKFAILDAGMTDLIRPALYQAYHK 314
                   L FE GR++V   G L+++V Y+K    K FAI+DA M DLIRPALYQA+  
Sbjct: 262 RIEGRGLALVFEPGRSIVANAGVLLTRVEYLKHTAHKDFAIVDAAMNDLIRPALYQAW-- 319

Query: 315 MENITSEEPVEA----YDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASG 370
             N+ + +P E     YD+VGPICE+ D   K  +L  V+ GDL+A+ SAGAYG +M+S 
Sbjct: 320 -MNVIAVQPHEGDTRRYDIVGPICETGDFLAKDRELALVE-GDLLAVCSAGAYGFVMSSN 377

Query: 371 YNCR 374
           YN R
Sbjct: 378 YNTR 381