Pairwise Alignments

Query, 386 a.a., diaminopimelate decarboxylase (EC 4.1.1.20) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 422 a.a., diaminopimelate DAP decarboxylase from Sinorhizobium meliloti 1021

 Score =  278 bits (710), Expect = 3e-79
 Identities = 162/370 (43%), Positives = 216/370 (58%), Gaps = 8/370 (2%)

Query: 11  RTLQTPFYYYDTKVLRDTLSAINQEVAKYPSYSVHYAVKANANPKVLTIIRESGMGADCV 70
           R + TPFY Y T  L       +Q  A   +  V YA+KAN+N  VL  +   G G D V
Sbjct: 23  RAVGTPFYCYSTATLERHYKVFSQAFADVDAM-VCYAMKANSNQAVLKTLGRLGAGLDVV 81

Query: 71  SGGEIRAAVRAGFPANKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQN 130
           S GE+R A+ AG PA +I+F+GVGK   E++  LE GI+CFNVES PELEV+N+ A    
Sbjct: 82  SEGELRRALAAGIPAGRIMFSGVGKTAREMDFALEAGIYCFNVESEPELEVLNQRAVRAG 141

Query: 131 KIANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDRVIDVALEMKNVKFIGLHFHIG 190
           + A V+FRINPDV A THA I+TG  ENKFGIS +    V   A E+  ++  G+  HIG
Sbjct: 142 RRAPVSFRINPDVDARTHAKISTGKKENKFGISWERARGVYAHAAELPGIEVTGIDMHIG 201

Query: 191 SQILDMGDFIALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNR-QSVPDFKSYFA 249
           SQI ++  F      + EL D L +   ++EH+++GGGLGI Y   N    +PD  +Y  
Sbjct: 202 SQITELQPFDDAFKLLRELVDTLRSDGHVIEHVDIGGGLGIPYREDNNPPPLPD--AYAD 259

Query: 250 TYAGQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTKKKFAILDAGMTDLIRPALY 309
               QLK    + +  E GR +VG  G L+++V+YVK G  K F I+D  M DLIRP LY
Sbjct: 260 IVKNQLKGLDCKIV-TEPGRLIVGNAGILVTEVVYVKDGGDKTFVIVDGAMNDLIRPTLY 318

Query: 310 QAYHKMENI---TSEEPVEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEI 366
           +AYH++  +    +  P    DVVGP+CE+ D      ++   K GDL A+ SAGAYG +
Sbjct: 319 EAYHEIRPVKISAASAPRIKADVVGPVCETGDYLALDREMAMPKPGDLFAIGSAGAYGAV 378

Query: 367 MASGYNCREL 376
            A  YN R L
Sbjct: 379 QAGTYNSRLL 388