Pairwise Alignments

Query, 182 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 176 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) from Shewanella amazonensis SB2B

 Score =  183 bits (464), Expect = 2e-51
 Identities = 92/173 (53%), Positives = 117/173 (67%), Gaps = 2/173 (1%)

Query: 1   MEVIKTNIEGVVIIEPRIFKDDRGYFFESFSQREFEEKVCKTTFVQDNESKSSYGVLRGL 60
           M+V+ T I  V +I P +F+D+RGYFFES+ Q+ F E V   TFVQDN+S S  G LRGL
Sbjct: 1   MQVLTTAINEVKLIIPSVFEDERGYFFESWQQQRFAELVAPVTFVQDNQSLSKRGTLRGL 60

Query: 61  HFQKPPFAQSKLVRVIKGAVLDVAVDIRKGSPTFGQYVSVELTGENHRQFFIPRGFAHGF 120
           H+Q+    Q KL+ V+ G + DVAVDIR  SPT+G++V   L+ ENHRQ FIP+GFAHGF
Sbjct: 61  HWQEA-HPQDKLISVLSGTIFDVAVDIRPESPTYGKWVGETLSAENHRQLFIPKGFAHGF 119

Query: 121 SVLSEEVIFQYKCDNFYSPQSEGAIAWNDPDLNIDWRIPAEKVVLSEKDSKHP 173
            VLSE  I  YKC +FY P+ E +I W+DP L I W I     +LS KD+  P
Sbjct: 120 YVLSESAIVSYKCSDFYHPEDERSIRWDDPSLAIQWPIEG-LPLLSAKDAMAP 171