Pairwise Alignments

Query, 182 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 182 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) from Shewanella loihica PV-4

 Score =  157 bits (397), Expect = 1e-43
 Identities = 77/171 (45%), Positives = 114/171 (66%), Gaps = 4/171 (2%)

Query: 1   MEVIKTNIEGVVIIEPRIFKDDRGYFFESFSQREFEEKVCKTTFVQDNESKSSYGVLRGL 60
           M+++ T+I  V ++EP++F D+RG FFE+F Q+ F+E +    FVQ+N+S S  G LRGL
Sbjct: 1   MKILNTSIPDVKLLEPQVFGDERGCFFETFRQQWFKEHLMDLDFVQENQSHSLQGTLRGL 60

Query: 61  HFQ-KPPFAQSKLVRVIKGAVLDVAVDIRKGSPTFGQYVSVELTGENHRQFFIPRGFAHG 119
           H+Q + P  Q KL+RV+ G + DV VD+R+ SP+FGQ+    L+ +N  Q ++P GFAHG
Sbjct: 61  HYQLRQP--QGKLIRVVSGEIFDVCVDLRRTSPSFGQWTGHHLSADNKHQLWVPPGFAHG 118

Query: 120 FSVLSEEVIFQYKCDNFYSPQSEGAIAWNDPDLNIDW-RIPAEKVVLSEKD 169
           F V+S E    YKC ++Y+P  E +I W+D  L IDW  +  +  +LS KD
Sbjct: 119 FYVVSPEAHCFYKCTDYYAPNDEHSIRWDDDTLAIDWPLLSTQSPLLSPKD 169