Pairwise Alignments

Query, 182 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 181 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) from Shewanella loihica PV-4

 Score =  180 bits (457), Expect = 1e-50
 Identities = 94/172 (54%), Positives = 120/172 (69%), Gaps = 4/172 (2%)

Query: 1   MEVIKTNIEGVVIIEPRIFKDDRGYFFESFSQREFEEKVC--KTTFVQDNESKSSYGVLR 58
           M++I T I  V IIEP +F D+RG+F E+++Q+ FEE V    T FVQDN SKS  G+LR
Sbjct: 1   MKIIDTKIPDVKIIEPTVFGDERGFFMETWNQKRFEELVTGKHTQFVQDNHSKSKKGILR 60

Query: 59  GLHFQKPPFAQSKLVRVIKGAVLDVAVDIRKGSPTFGQYVSVELTGENHRQFFIPRGFAH 118
           GLH+Q     Q KLVRVI G V DVAVDIRKGSPTFG++V   L+ EN+RQ ++P GFAH
Sbjct: 61  GLHYQTEN-TQGKLVRVIYGEVFDVAVDIRKGSPTFGKWVGEYLSAENNRQLWVPEGFAH 119

Query: 119 GFSVLSEEVIFQYKCDNFYSPQSEGAIAWNDPDLNIDWRIPAEKVVLSEKDS 170
           GF V SE   F YKC ++Y+P  E +I W+D  L+I+W   +E  +LS KDS
Sbjct: 120 GFYVTSEHAEFVYKCTDYYNPHMECSIQWDDKFLSIEWPFESEP-ILSSKDS 170