Pairwise Alignments

Query, 300 a.a., AraC-type transcription regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 290 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score = 63.5 bits (153), Expect = 5e-15
 Identities = 48/219 (21%), Positives = 103/219 (47%), Gaps = 12/219 (5%)

Query: 80  VIALPNQIIEHRQFSSNFRGIFFAVSKSLLESLPKVGNVLSFFFFLKDYPCFDLNLHEQE 139
           ++ +P  ++   QFSS+ RG    ++  L++ +  +G+ L     L       L     E
Sbjct: 74  MVNVPRGVVHGFQFSSDTRGWVLTLTSDLMDQV--LGDSLGILTTLDRAAVTPLR---DE 128

Query: 140 MIKEYHAFIRKRLKNKDDRYRREVVMGLMQGFFFELCNIFNSYAPDASAVVKSKSRKEYI 199
           +++   A   +   + D   R  ++ GL+      +          A     +  +   +
Sbjct: 129 LLQLLTAI--RDAYDADGFARTPILRGLVGAITGTVAQCIG-----AQQSRDANPKAHQL 181

Query: 200 FERFYESLVQSYQSERSVKFYADQLCLTPKHLSGVVKEVSGKTVGEWIDELVILEAKALL 259
           F RF   + + +++ R V  YA +L ++  HL+ +  + +G++  + I+E ++ EA+ LL
Sbjct: 182 FARFETLVNRDFRARRQVSDYARELAVSTTHLNRISHQATGQSASQLINERMLREARRLL 241

Query: 260 NSSSMNIQEIADRLNFANQSFFGKYFKHYTGMSPKEYRK 298
             +SM+  +IA  L +A+ + F + F   TG+ P+ +R+
Sbjct: 242 IYTSMSAAQIAYELGYADPAHFSRVFARGTGLPPRRFRR 280