Pairwise Alignments

Query, 555 a.a., conserved hypothetical protein, putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 562 a.a., transporter from Azospirillum brasilense Sp245

 Score =  145 bits (367), Expect = 3e-39
 Identities = 131/582 (22%), Positives = 258/582 (44%), Gaps = 49/582 (8%)

Query: 1   MEWLYNLFLEHSALQAVVVLSLISAIGLGLGRVHFWGVSLG-VTFVFFAGILAGHFGLSV 59
           M WL+++  +       + L L  A G  +G+  F    LG V       ++    G+S+
Sbjct: 1   MSWLHSIVNQSPE----IALFLSLAGGYWIGKFQFGKFQLGGVAGSLLVAVVISQIGVSI 56

Query: 60  DPQMLNYAESFGLVIFVYSLGLQVGPGFFSSFRKGGVTLNMLALAVVLLGTLLTVVASYA 119
           D    N  ++    +F+Y++G + GP FF S  +  +   +LA  + + G +  V+ +  
Sbjct: 57  D----NGVKAVLFALFIYAVGFESGPKFFQSLGRQSIREIILAAVLAISGLVTVVIMARL 112

Query: 120 TGVSLPDMVGILCGATTNTPALGAAQQTLKQMGIESS-------TPALGCAVAYPMGVIG 172
           TG+      GI  G  T +  +G A   + ++G+ +          A+G AV Y  G  G
Sbjct: 113 TGLDKGLAAGIASGGLTQSAIIGTASSAIGKLGLPAEEVQRLQGNVAVGYAVTYIFGSFG 172

Query: 173 VILAVLLIRKFLVHK--EDLEIKEKDD--ANKTFIAAFQVHN-PAIFNKSIK-------D 220
            IL  + +  +++ +   D  IK +    A   F+A  + +  P +  +  +        
Sbjct: 173 AILVCVNLLPWIMKRGIRDDAIKAETAMLAGAHFLARGEEYAMPPLVGRLYRIERAAGRT 232

Query: 221 IAQMSYPK----FVISRLWRDGHVSIPTSDKVLKEGDRLLVITAEKNVLALTVLFGEQEE 276
           +AQ+          + R+ R+  +     D  L+ GD +L++     V+ L    G + +
Sbjct: 233 VAQIEADSADGPVSVERVKRNNALIGMQPDLRLEAGDVVLLVGRRSGVVGLADTLGPELQ 292

Query: 277 NTDWNKEDIDWNAIDSELISQRIVVTRPELNGKKLGSLRLRN----HYGINISRVYRSGV 332
           ++           +D  ++ + + +  P    + +  +R  +    ++G+ ++ + RS  
Sbjct: 293 SSQ---------GMDLIMLVRDVAIANPAFVHRTVAEIRKLSSANLYHGVYVTGLKRSDR 343

Query: 333 QLLATPELILQLGDRLTVVGEAAAIQNVEKVLGNAVKSLKEPNLVVIFIGIVLGLALGAI 392
            L   P+ +++ GD +T+ G A  +Q V   +G  V +  + + +   +G+ LGL +G  
Sbjct: 344 PLPLAPDTVIEAGDVVTLYGTAEDVQRVAASVGTEVIASDKTDFIYHGLGLALGLLVGLA 403

Query: 393 PFSIPGISTPVKLGLAGGPIIVGILLGTFGPRIHMITYTTRSANLMLRALGLSMYLACLG 452
              I  I  P+ LG  GG ++ G+L G +  R   I      A+ +LR LGL+ ++A +G
Sbjct: 404 VIRIGDI--PLTLGSGGGALLAGLLFGWYRTRNLAIGNMPTPASTLLRDLGLAGFVAVVG 461

Query: 453 LDAGAHFFDTVFRPEGLLWIALGAGLTIIPTVLVGFVAFKIMKIDFGSV-SGMLCGSMAN 511
           L +G     TV    GL    +G  +T++P ++  FV   +++ D  ++ +G L GS + 
Sbjct: 462 LQSGRQAVSTVVE-SGLSIFLVGVVVTLVPMIITLFVGRYLLRYDNAAIFAGALAGSRSA 520

Query: 512 PMALNYANDTIPGDNPSVAYATVYPLCMFLRVIIAQVLLMFL 553
             A     D      P+V +A  Y L      ++  +++ F+
Sbjct: 521 NPAFGEVLDKAGNSIPTVPFAITYALANVFLTLLGPLVVAFV 562