Pairwise Alignments

Query, 555 a.a., conserved hypothetical protein, putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 559 a.a., transporter from Azospirillum brasilense Sp245

 Score =  398 bits (1022), Expect = e-115
 Identities = 217/550 (39%), Positives = 345/550 (62%), Gaps = 22/550 (4%)

Query: 17  VVVLSLISAIGLGLGRVHFWGVSLGVTFVFFAGILAGH----FGLSVDPQMLNYAESFGL 72
           +++LS+++A GL LG++   GV LG+  V FAGI AGH     GL+ D  +L++   FGL
Sbjct: 18  MLMLSVVAASGLALGQIKVRGVGLGIGGVLFAGIAAGHVAKALGLTFDHHVLHFMREFGL 77

Query: 73  VIFVYSLGLQVGPGFFSSFRKGGVTLNMLALAVVLLGTLLTVVASYATGVSLPDMVGILC 132
           ++FVY++G+QVGPGFF++ +K G+TLN+LA ++V LG L+ V      GV LP ++GI  
Sbjct: 78  ILFVYTIGVQVGPGFFAALKKSGLTLNLLAASLVGLGVLVAVAIHEIGGVPLPAVLGIFS 137

Query: 133 GATTNTPALGAAQQTLKQMGI---ESSTPALGCAVAYPMGVIGVILAVLLIRKFLVHKED 189
           GA TNTP+LGAAQ+ L+++G    E +TP+LG AVAYP G++G+++ + LIR        
Sbjct: 138 GAVTNTPSLGAAQEMLREVGASAAEINTPSLGYAVAYPFGIVGILITMGLIRVVFRIDPA 197

Query: 190 LEIKEKDDANKTFIAAFQVHNPAIFNKS-----IKDIAQMSYPKFVISRLWRDGHVSIPT 244
            E +  +   +  +   +  + A+ N+S     ++D+A       +ISRL R+G + +P 
Sbjct: 198 AEAEAFERKRRAQVETLETLDVAVRNRSAMGLPLRDMALFGDQGVMISRLLREGRLQVPH 257

Query: 245 SDKVLKEGDRLLVITAEKNVLALTVLFGEQEENTDWNK-EDIDWNAIDSELISQRIVVTR 303
            D  L+ GD + ++     + A   L GE  E T   K  D+ W+         R+VVT 
Sbjct: 258 PDTCLRAGDVVHLVGPRVKLEATKRLLGEAAEVTLTTKGTDMRWD---------RLVVTN 308

Query: 304 PELNGKKLGSLRLRNHYGINISRVYRSGVQLLATPELILQLGDRLTVVGEAAAIQNVEKV 363
             + GK +G L L + Y + +SRV R+GV+L+ +P L LQ GD LT +G+ + +Q V  +
Sbjct: 309 EHVLGKAIGQLDLADAYDVVVSRVNRAGVELVPSPALHLQFGDILTAIGKPSDLQRVAAL 368

Query: 364 LGNAVKSLKEPNLVVIFIGIVLGLALGAIPFSIPGISTPVKLGLAGGPIIVGILLGTFGP 423
           +GN+ + L++   V +FIGI+LG+ LG+IPF IPG+  P+KLGLAGGP++  ILL   G 
Sbjct: 369 MGNSARRLQQVEFVPVFIGILLGVLLGSIPFYIPGMPAPLKLGLAGGPLVAAILLARIGH 428

Query: 424 RIHMITYTTRSANLMLRALGLSMYLACLGLDAGAHFFDTVFRPEGLLWIALGAGLTIIPT 483
              ++ +   +AN+ LR +G+ ++LA +GL +G  F +T+   +GLLWI  G  +T+IP 
Sbjct: 429 IGPLVWFMPPAANMALREIGIVLFLAVVGLMSGDRFVETLVHGDGLLWIGCGMLVTLIPL 488

Query: 484 VLVGFVAFKIMKIDFGSVSGMLCGSMANPMALNYANDTIPGDNPSVAYATVYPLCMFLRV 543
           ++VG +A    + ++ ++ G+L GSM +P AL +AN     + P++AYATVYP+ MFLR+
Sbjct: 489 LVVGVIARAFARQNYLTICGLLSGSMTDPPALAFANAMSASEAPALAYATVYPMVMFLRI 548

Query: 544 IIAQVLLMFL 553
           +  Q++++FL
Sbjct: 549 LAPQLIVLFL 558