Pairwise Alignments

Query, 555 a.a., conserved hypothetical protein, putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 549 a.a., transporter from Azospirillum brasilense Sp245

 Score =  361 bits (927), Expect = e-104
 Identities = 203/551 (36%), Positives = 320/551 (58%), Gaps = 20/551 (3%)

Query: 15  QAVVVLSLISAIGLGLGRVHFWGVSLGVTFVFFAGILAGHF----GLSVDPQMLNYAESF 70
           + V +L + SA+GL LG +   GV LG+  V FAGI  GHF    G++++ +M+ +   F
Sbjct: 6   RVVFMLGITSALGLALGHIRLRGVGLGIGGVLFAGIAVGHFAKQAGVTLNAEMMEFIRDF 65

Query: 71  GLVIFVYSLGLQVGPGFFSSFRKGGVTLNMLALAVVLLGTLLTVVASYATGVSLPDMVGI 130
           GL++FVY++G+QVGPGFF++ +K G+ LN LAL +V    LLT +      V L   +G+
Sbjct: 66  GLILFVYTIGIQVGPGFFAALKKSGLALNGLALLMVGSSILLTAILVLFDLVPLGSGLGV 125

Query: 131 LCGATTNTPALGAAQQTLKQMGIESST---PALGCAVAYPMGVIGVILAVLLIRKFLVHK 187
             G  TN PAL A+QQ LK++G +++    P L  AV YP G+ G +LA+  +R      
Sbjct: 126 FAGGVTNAPALAASQQVLKEVGADAAVMALPGLAFAVTYPFGIAGNLLAMAAVRIVFRID 185

Query: 188 EDLEIKEKDDANKTFIAAFQ-----VHNPAIFNKSIKDIAQMSYPKFVISRLWRDGHVSI 242
              E +  + A +  +AA       V NPA+    + D+  +       SRL R G + +
Sbjct: 186 PQEEARAFEAARRAEVAALDTMDIAVTNPALRGVRLGDLTLLPSLGVCASRLLRGGQLRV 245

Query: 243 PTSDKVLKEGDRLLVITAEKNVLALTVLFGEQEENTDWNKEDIDWNAIDSELISQRIVVT 302
           P  D  L+EGD L V+     +  + +L G +         D+      S+L  +RIVVT
Sbjct: 246 PGEDTRLEEGDVLHVVGPRPKLEQVRLLMGREA--------DVRLTTKGSDLRWERIVVT 297

Query: 303 RPELNGKKLGSLRLRNHYGINISRVYRSGVQLLATPELILQLGDRLTVVGEAAAIQNVEK 362
              + GK + +L L+    + +SRV R+GV+L+    L LQ GD LTV+G+   ++    
Sbjct: 298 ANPVLGKSIAALNLKGACDVVVSRVNRAGVELVPNAALKLQFGDILTVIGKPDDLKAAGC 357

Query: 363 VLGNAVKSLKEPNLVVIFIGIVLGLALGAIPFSIPGISTPVKLGLAGGPIIVGILLGTFG 422
           ++GN+ + L+   ++ +F+GI LG  LGAIP  +PG+  P++LG+AGGP+IV I+L   G
Sbjct: 358 IIGNSERRLQTVEMIPVFVGITLGALLGAIPLFLPGMPAPLRLGMAGGPLIVAIVLARIG 417

Query: 423 PRIHMITYTTRSANLMLRALGLSMYLACLGLDAGAHFFDTVFRPEGLLWIALGAGLTIIP 482
               ++ +   +ANL LR +G+ ++LA LG+ +G  F +T+    GL W+A G  +T++P
Sbjct: 418 HIGPLVWFMPPAANLALREIGIVLFLAVLGIASGDRFVETMASGAGLPWMAWGVLVTLVP 477

Query: 483 TVLVGFVAFKIMKIDFGSVSGMLCGSMANPMALNYANDTIPGDNPSVAYATVYPLCMFLR 542
            +L G +A  +MK++F S+ G+L G+  NP  L YAN  +  + P++AYATVYPL M LR
Sbjct: 478 LLLTGLLARGVMKLNFLSICGVLAGAQTNPPGLAYANAVVASEAPALAYATVYPLAMCLR 537

Query: 543 VIIAQVLLMFL 553
           ++  Q+L++ L
Sbjct: 538 ILAPQLLVLML 548