Pairwise Alignments

Query, 438 a.a., Na+/solute symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

 Score =  109 bits (273), Expect = 2e-28
 Identities = 106/398 (26%), Positives = 169/398 (42%), Gaps = 26/398 (6%)

Query: 1   MIGATISGVTFVSVPGMVRGMDMTYMQTVFGFFFGYMIVAHILLPLYYRLNLTSIYGYLG 60
           ++   IS +TF+ +PG V    M  +     +           +P++YR+  TSIY YL 
Sbjct: 50  ILATYISAMTFIGMPGWVYQSGMEALNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLE 109

Query: 61  TRIGVNAYRTGSFFFLLSRMLGTAAKLYLVCLILHTHVFQDMHIPFWVIAVGSVALVWIY 120
            R GV A    S  F+L + + +   LY + LIL     Q + I      V        Y
Sbjct: 110 HRFGVYARTINSVVFILVQCISSGVILYAIALIL----IQILPISIVEAIVYITLFTACY 165

Query: 121 THKSGIKTIVWTDTLQTFCLIAALLFIIYFTIQKLDVGFDGIVQTIRHSEHSRIFVFDDW 180
           T+  GI T++WTD LQ+  LIA  + I  F +  L V  DG+    R   +     FD  
Sbjct: 166 TYAGGISTVIWTDMLQSAVLIAGSVAI--FVLLLLQV--DGVHGVSREQLNIINLQFDLG 221

Query: 181 MSRQNFFKQFFSGIFIVIVMTGLDQDMMQKNLSCRNLHEAKKNMYCYGFSFIPLNFLFLC 240
           +     +    +  F+ + + G +Q ++Q+ L+ R    A+K+M   G+    + F F  
Sbjct: 222 VD-TTLWAGVVAVSFLHMSVYGTNQLIIQRTLATRCEKTAQKSMLLCGYGAFFIYFFFAL 280

Query: 241 LGILLIALAGQMQLELPAMNDDILPMFATQGYLGQSVLILFTIGIIAAAFSNSDSALTAM 300
           LG+LL       +      N+ IL       +    V+ L    + AAA S  DS   +M
Sbjct: 281 LGVLLSIF--YQERHFTNSNEVILDF--VFHHTNPWVIGLIISALAAAAMSTLDSTYNSM 336

Query: 301 TTSVCIDLL------NTDKDTEETARRKRKKVHLSLSILLAFFICLVEMLNNKSVIDAIY 354
            T    DL       N      +   RK   V   L ++ A        ++N+SV+  I 
Sbjct: 337 ATVATFDLYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALL-----AVSNESVLKTIA 391

Query: 355 IIASYTYGPLLGMFAFGLFTRRRTKDRLV--PLIAIAS 390
            + S   G  LG F  GLF+ +  +  ++   +I+IA+
Sbjct: 392 SLTSIFVGIRLGSFVLGLFSNQANEKGVIAGSIISIAA 429