Pairwise Alignments

Query, 438 a.a., Na+/solute symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 506 a.a., Na+/proline symporter from Sphingomonas koreensis DSMZ 15582

 Score =  116 bits (291), Expect = 1e-30
 Identities = 98/443 (22%), Positives = 193/443 (43%), Gaps = 39/443 (8%)

Query: 1   MIGATISGVTFVSVPGMVRGMDMTYMQTVFGFFFGYMIVAHILLPLYYRLNLTSIYGYLG 60
           ++ AT S  TF+  P      D +Y+  V         VAH+L+P +Y +  T++Y  L 
Sbjct: 54  VLSATQSAATFLGAPDQGYRGDYSYLGAVLAPVLAAFFVAHVLIPRFYAMRATTVYELLE 113

Query: 61  TRIGVNAYRTGSFFFLLSRMLGTAAKLYLVCLILHTHVFQDMHIPFWVIAVGSVALV-WI 119
            R    A       FL+ R+L   A++YL  + +    F  +     + +  +V LV ++
Sbjct: 114 ARFDARAKHWAGGMFLIGRVLAGGARVYLAAIAIAMVAFGSIDAQAIIFSAAAVMLVSFL 173

Query: 120 YTHKSGIKTIVWTDTLQTFCLIAALLFIIYFTIQKLDVGFDGIVQTIRHSEHS----RIF 175
           +T   G+K+++W D +Q      + + ++ F    +      ++  + ++       R+ 
Sbjct: 174 FTFHGGLKSVIWNDLIQFVIYAGSAVAVLVFLRLSIPASNAELIAALSNTPEGVNKLRLL 233

Query: 176 VFDDWMSRQNFFKQFFSGIFIV-IVMTGLDQDMMQKNLSCRNLHEAKKNMYCYGFSFIPL 234
            F   +S+       F+G+F++ +   GLDQD  Q+ L+  +     + +     + +PL
Sbjct: 234 DFSTDLSKPFTVLAIFTGLFLLNVANAGLDQDTTQRLLASPDAKAGARGLIYSQLASVPL 293

Query: 235 NFLFLCLGILLIALAGQMQLELPAMNDDILPMFATQGYLGQSVLI--------------- 279
             +F+ +G+LL     +  L + A N       A   + G+ + +               
Sbjct: 294 IAMFVTIGLLLYVFYNRPDL-MGADNQ------AATSFAGEKITVFVHYILTQVPPGLRG 346

Query: 280 LFTIGIIAAAFSNSDSALTAMTTSVCIDLLNTDKDTEETARRKRKKVH-----LSLSILL 334
           L TIG+ AAA + ++SAL AM++ +  D     ++    A  K   VH     ++L  L 
Sbjct: 347 LVTIGVTAAAVATTNSALNAMSSVMISDFYKPWRERRGEASPKH-YVHAGRWGMALVGLA 405

Query: 335 AFFICLVEML----NNKSVIDAIYIIASYTYGPLLGMFAFGLFTRRRTKDRLVPLIAIAS 390
            F + ++        +  +++    +  + Y  LLG++   +FT R +   ++  + IA 
Sbjct: 406 MFAMAVLSFYWQRHTDMPLLEFALQVMVFAYAGLLGVYFVAVFTARGSSGSVIAGL-IAG 464

Query: 391 PVLCYALDWWINKETGYKFGYEL 413
            V  + L  ++   TG  F Y+L
Sbjct: 465 FVTVFLLQPFVLGPTGLAFPYQL 487