Pairwise Alignments

Query, 438 a.a., Na+/solute symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 549 a.a., transporter, SSS family from Sphingomonas koreensis DSMZ 15582

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 81/375 (21%), Positives = 153/375 (40%), Gaps = 22/375 (5%)

Query: 1   MIGATISGVTFVSVPGMVRGMDMTYMQTVFGFFFGYMIVAHILLPLYYRLNLTSIYGYLG 60
           +I A IS    V + G    + +      +      +IV    LP++ +  + ++  +L 
Sbjct: 56  LIAANISAEQIVGMSGSGYAIGLAIASYEWMAALTLLIVGKWFLPIFLKNEIYTMPQFLE 115

Query: 61  TRIGVNAYRTGSFFFL-LSRMLGTAAKLYLVCLILHTHVFQDMHIPFWVIAVGSVALVWI 119
            R G       + F+L L   +   + L+L  + +      D  I  +   +G+ ALV  
Sbjct: 116 QRFGPTIRTVMAVFWLALYIFVNLTSILWLGSIAVTQVAGVDQDIALF--GLGAFALV-- 171

Query: 120 YTHKSGIKTIVWTDTLQTFCLIAALLFIIYFTIQKLDVGFDGIVQTIRHSEHSRIFVFDD 179
           Y  + G+K +  TD +Q   L+   L I Y T+ K+  G  G++             FD 
Sbjct: 172 YQLRGGLKAVALTDIVQVTLLVLGGLVISYLTLSKIG-GDAGVMGGFTRLTTELPGKFDM 230

Query: 180 WMSRQNFFKQFFSGIFIVI--------VMTGLDQDMMQKNLSCRNLHEAKKNMYCYGFSF 231
            ++  N F +   G+ ++I           G +Q ++Q+ L+ ++L EA+K +    F  
Sbjct: 231 ILAPDNPFYKDLPGLSVLIGGMWIANLSYWGFNQYIIQRALAAKSLSEAQKGVVFAAFLK 290

Query: 232 IPLNFLFLCLGILLIALAGQMQLELPAMNDDILPMFATQGYLGQSVLILFTIGIIAAAFS 291
           + +  + +  GI  + LA  +     A  D   P       L   +L L    ++AA  +
Sbjct: 291 LLMPVIIVLPGIAAVILAPDL-----AKPDQAYP--TMMRLLPVGLLGLVFAALVAAIIA 343

Query: 292 NSDSALTAMTTSVCIDLLNTDKDTEETARRKRKKVHLSLSILLAFFICLVEMLNNKSVID 351
           ++ S + ++ T   +DL    K  +  A+          S L A     +  +   + + 
Sbjct: 344 STASKINSIATIFTLDLYAKAKGVQSRAQDAATASASGDSGLTAAHEKQLVRVGRTTAVV 403

Query: 352 AIYIIASYTYGPLLG 366
           A  ++A +T  PLLG
Sbjct: 404 AT-LLAIFTARPLLG 417