Pairwise Alignments

Query, 438 a.a., Na+/solute symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 533 a.a., SSS sodium solute transporter superfamily (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 71.2 bits (173), Expect = 7e-17
 Identities = 74/326 (22%), Positives = 148/326 (45%), Gaps = 30/326 (9%)

Query: 1   MIGATISGVTFVSVPGMVRGMDMTYMQTVFGFFFGYMIVAHILLPLYYRLNLTSIYGYLG 60
           +  + +SG +FV + G      +      +      ++ A  +LP + +  ++++  +L 
Sbjct: 57  LFASNMSGSSFVGLMGGAYANGIVIFNYEWTAALVLILFAIFVLPSFLKAKISTVPEFLE 116

Query: 61  TRIGVNAYRTGSFFFLLSRM-LGTAAKLYLVCLILHTHVFQDMHIPFWVIAVGSVALV-W 118
            R  V + R  S F +L+ + + TA  LY   L++        ++  W  AV  +ALV  
Sbjct: 117 QRYDVRSRRAFSIFTILAILFIDTAGALYAGGLVISNVTG---YLNLWT-AVAVLALVAG 172

Query: 119 IYTHKSGIKTIVWTDTLQTFCLIAALLFIIYFTIQKLDVGFDGIVQTIRHSEHSRIFVFD 178
           IYT   G+  +V TDT+Q   LI     + +  + ++  G++ +   I       I   D
Sbjct: 173 IYTILGGLSAVVVTDTVQAILLIIGAAILFWLGLDEIG-GWEQLFVDIPEGHDQLILPAD 231

Query: 179 DWMSRQNFFKQFFSGIFIVIVM----TGLDQDMMQKNLSCRNLHEAKKNMYCYGFSFIPL 234
           D     +F    ++G++ V+++      ++Q ++Q+ L  +NL E +      GF  +P 
Sbjct: 232 D-----DFLP--WTGLWGVVLLGFYYWTINQFVVQRTLGAKNLKEGQIGALFAGFLKLPN 284

Query: 235 NFLFLCLGILLIALAGQMQ---LELPAMNDDILPMFATQGYLGQSVLILFTIGIIAAAFS 291
            FL +  G++ + L  +++   L  P +  +++P+          V  L    +IAA  S
Sbjct: 285 IFLMIIPGVIALKLYPELETPDLAFPTLAFELMPI---------GVRGLIMAALIAAIMS 335

Query: 292 NSDSALTAMTTSVCIDLLNTDKDTEE 317
           + DSA+ + +T V  D +    + +E
Sbjct: 336 SLDSAMNSASTLVVKDFVEPIWEVDE 361