Pairwise Alignments

Query, 438 a.a., Na+/solute symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 526 a.a., SSS sodium solute transporter superfamily (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 85/389 (21%), Positives = 160/389 (41%), Gaps = 28/389 (7%)

Query: 1   MIGATISGVTFVSVPGMVRGMDMTYMQTVFGFFFGYMIVAHILLPLYYRLNLTSIYGYLG 60
           +  + IS  T V + G      +T     +      + +A I  P++ +  +++   YL 
Sbjct: 57  LFASNISTSTLVGLTGSAYTGGLTVSSYEWMAGIPLLFMAFIFAPVFLKSRISTTPEYLE 116

Query: 61  TRIG--VNAYRTGSFFFLLSRMLGTAAKLYLVCLILHTHVFQDMHIPFWVIAVGSVALVW 118
            R    V  Y +G    + + ++ TA  LY   ++L    F D+ I    +A+G  A   
Sbjct: 117 NRYSRRVRLYFSG-LTIVFTVIVDTAGGLYAGAVVLKVF-FPDLDIWMSCVAIGLFA--G 172

Query: 119 IYTHKSGIKTIVWTDTLQTFCLIAALLFIIYFTIQKLDVGFDGIVQTIRHSEHSRIFVFD 178
           IYT   G++ +V+TD LQ   LI       +   Q +D  ++ +   +     S +   D
Sbjct: 173 IYTATGGLRAVVYTDILQAVVLICGTGLTAFLMYQSVDFSWESVRSQVPEGHLSIVQPID 232

Query: 179 D----WMSRQNFFKQFFSGIFIVIVMTGL-DQDMMQKNLSCRNLHEAKKNMYCYGFSFIP 233
           D    W          F+G++++     + +Q ++Q+ L  ++L  A+      G   I 
Sbjct: 233 DDTLPWPG-------LFTGVWLLGFWYWVTNQYIVQRVLGAKDLSNAQWGAILGGILKIL 285

Query: 234 LNFLFLCLGILLIALAGQMQLELPAMNDDILPMFATQGYLGQSVLILFTIGIIAAAFSNS 293
             F  +  G++ +     +Q      +D + P+  T+  L   +  L   G+IAA  S  
Sbjct: 286 PTFFIILPGVMALVTLPDIQ-----NSDQVFPIIITE-VLPSGLTGLVMAGLIAAIMSTV 339

Query: 294 DSALTAMTTSVCIDLL-NTDKDTE-ETARRKRKKVHLSLSILLAFFICLVEMLNNKSVID 351
           DS L + +T +  D L   +K+ + ETA++      L   ++   +  L++      +  
Sbjct: 340 DSTLNSSSTLLINDFLTRPEKEPDPETAKKWGMMATLGFMVIAIAWAPLIQYFG--GLWA 397

Query: 352 AIYIIASYTYGPLLGMFAFGLFTRRRTKD 380
            I    S    PL+  F  G    R T++
Sbjct: 398 YIQQAFSVLVPPLVVCFTLGALWSRGTEN 426