Pairwise Alignments

Query, 1057 a.a., ATP-dependent helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 726 a.a., DNA-dependent helicase II (RefSeq) from Shewanella loihica PV-4

 Score = 50.8 bits (120), Expect = 3e-10
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 8/98 (8%)

Query: 378 VFEKIGTNIRNVMIDEFQDTSRMQWGNFKLLLLEGLSQGADSLIVGDVKQSIYRWRNGDW 437
           + E      +N+++DEFQDT+ +Q+   ++L        A+ +IVGD  QSIY WR    
Sbjct: 206 ILEHYQERFKNILVDEFQDTNAIQYAWIRVL----AGSTANVMIVGDDDQSIYGWRGAQ- 260

Query: 438 GILNGLNDRIEHFP-IKVKTLATNRRSETNVIRFNNQI 474
             +  L+  ++ FP  +   L  N RS  N++  +N++
Sbjct: 261 --VENLHRFLQDFPAAQTIRLEQNYRSSGNILNASNEL 296



 Score = 44.7 bits (104), Expect = 2e-08
 Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 2  SELLVYKASAGSGKTFTLAVEYIKLLILNPRAYRQILAVTFTNKATAEMKERI 54
          S +LV  A AGSGKT  L      L+ +  ++   ILAVTFTNKA AEM+ER+
Sbjct: 23 SSMLVL-AGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAAAEMRERV 74