Pairwise Alignments

Query, 560 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 543 a.a., polysaccharide lyase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  692 bits (1786), Expect = 0.0
 Identities = 343/521 (65%), Positives = 405/521 (77%), Gaps = 2/521 (0%)

Query: 22  AQYPVIPDSVKERGAKQEAEFEQKSNAAWEKALPTVLEEARLGRPYKPWASKPEDLIKSN 81
           +QYPVIP++++++        E+KS   + K    V EEA+ G+PY PWA+KP DL ++ 
Sbjct: 22  SQYPVIPEAMEKKADSLLKSIEEKSELQFLKVKHIVDEEAKHGKPYIPWAAKPGDLPQAK 81

Query: 82  IPAFPGAEGGGMYTPGGRGGKVIVVTSLEDSGPGTFREACETGGARVIVFNVSGIIRLKS 141
             AFPGAEGGG Y+ GGRGGKV VVTSLEDSG GT REACE GGAR+IVFNVSGIIRLK+
Sbjct: 82  TVAFPGAEGGGAYSFGGRGGKVYVVTSLEDSGKGTLREACEQGGARIIVFNVSGIIRLKT 141

Query: 142 PISVRAPYVTIAGQTAPGDGICVTGHSFLIDTHDVVIRHMRFRRGAQDVAFRDDAVGGNA 201
           P+ +RAPY+TIAGQ+APGDG+CV G S  I+THDVVIR+MRFRRG  DV  RDDA+GGN 
Sbjct: 142 PLIIRAPYITIAGQSAPGDGVCVAGESVWINTHDVVIRYMRFRRGQTDVTRRDDAIGGNP 201

Query: 202 VGNIIIDHCSASWGLDENMSIYRHVYNRDETGHGLKLPTVNITIQNSMFSEALDTYNHAF 261
           VGNIIIDH SASWGLDENMSIYRHVY++++     KLPTVN+TIQNS+FSEALDTYNHAF
Sbjct: 202 VGNIIIDHVSASWGLDENMSIYRHVYDKEDGSKPEKLPTVNVTIQNSIFSEALDTYNHAF 261

Query: 262 GATIGGHNSMFCRNLFASNISRNSSVGMDGDFNFVNNVVFNWWNRSVDGGDNKSFYNIIN 321
           G+TIGG NS F RNL+ASNISRN SVGM GDF F NNV+FNWWNRS DGGDN S Y+ IN
Sbjct: 262 GSTIGGLNSTFMRNLWASNISRNPSVGMYGDFGFANNVIFNWWNRSADGGDNASLYSFIN 321

Query: 322 NYFKPGPITPLDKPISYRILKPEAGRDKSKPMSFGKAYVNGNIVHGNAKVTKDNWDGGVQ 381
           NY+KPGPITP  +PISYRILKPE+GRDK     FG+AYV GNI+ GN KVTK+NWDGGVQ
Sbjct: 322 NYYKPGPITPAGEPISYRILKPESGRDKKFSNEFGRAYVTGNIIEGNEKVTKNNWDGGVQ 381

Query: 382 LASEVDEGKFLPQIRVDEAFKMSPVTIMDTKKAYNFVLDNVGATLPKRDAVDARVIKTVQ 441
             S+ D+ K L  ++VD+   M+ ++I+DTKKAY++VL N GA+LP RDAVD R+IK V 
Sbjct: 382 PESKRDKQKLLDSMKVDKPLPMAKISIIDTKKAYDYVLANAGASLPVRDAVDQRIIKQVT 441

Query: 442 TGKAIYAKDAP-EFVSPYVKRRLPADSYKQGIITDIRQVGGLPEYKGEAYLDSDGDGMPD 500
           TGK  + +D        YVKRRLPADSYKQGII+DI QVGG PEYKG+ YLDSD DG+PD
Sbjct: 442 TGKIEHVEDGKLPAKQSYVKRRLPADSYKQGIISDIAQVGGYPEYKGKPYLDSDHDGIPD 501

Query: 501 AWEIANGLNPNDPTDAKEDCNGDGYTNIEKYINGLDTKKKV 541
           AWEI NGLNP D  DA +  +  G  NIE Y+N L    KV
Sbjct: 502 AWEIKNGLNPKDAKDATK-LSKSGDANIEVYLNSLVDINKV 541