Pairwise Alignments

Query, 163 a.a., ECF-type sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 192 a.a., hypothetical protein from Azospirillum brasilense Sp245

 Score = 50.8 bits (120), Expect = 1e-11
 Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 10/163 (6%)

Query: 2   AAFSQLYDLHINILFNYGLKLTIDKELLKDCIHDIFVKLYTKKDELGTIDNLK--SYLFI 59
           AA+  L   H+   +    +++      +D   D F++++ ++D   T +  K  ++L+ 
Sbjct: 22  AAYRALVHRHLKRAYALARRMSGSDAEAEDIAQDAFLQVWQRRDHW-TDEGAKFTTWLYR 80

Query: 60  SLKNKLCDELRKRMYMSDTAIEDVNAVA-PTDVEDDYMEEEQRKNEFSLVKRLLDQLSPR 118
            + N+  D  R+       A ED+++V  P D   D +   QR+   + ++   D+L  +
Sbjct: 81  VVLNRCIDHKRR------PAGEDLDSVPEPPDHAPDAVTHIQRRQVAARLRDAQDRLPQQ 134

Query: 119 QREALTLYYIEEKKYEDICEIMNMNYQSVRNLMHRGLTKLRSL 161
           QR AL LYY E     ++  IM ++  +V +L+ R   +LR+L
Sbjct: 135 QRAALALYYNEGLSGAEVATIMQISVTAVESLLKRARQQLRTL 177