Pairwise Alignments

Query, 394 a.a., conserved hypothetical protein, putative transmembrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 375 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  102 bits (253), Expect = 2e-26
 Identities = 88/370 (23%), Positives = 162/370 (43%), Gaps = 14/370 (3%)

Query: 11  RSVLLREWRRMTSRRLYLCVCIILPLFTLFFMATIFGNGQMENIPIGIVDQDNTASSRAI 70
           +++L RE   +      L +   LP+  +  +  +F       +P+ +VD DN++ SR +
Sbjct: 2   KTLLRRELGALWQNPWQLALVSYLPILAMLALWWLFSAALPRQLPVAMVDLDNSSLSREL 61

Query: 71  TRNISAVPTFKVTRHFVNEEAARKAVQKKEIYGYLSIPPKFEQDAISGKNATLSYYYHYA 130
            R+I+A P       F +   A  A+ + E+Y  + +P  F +D  +G   T+   Y+  
Sbjct: 62  GRHIAASPVISPIS-FASLPQAEDAMNRAEVYALVVVPHGFSRDLKTGAQPTVDVRYNGQ 120

Query: 131 LLSVGGELMAAFETSLAPVSLSPIVMQAVALGVEQDKITTFLLPVQASNHPIYNPSLDYS 190
            L VG  L A  + ++A         + +A G    +    + P+      ++N + +Y 
Sbjct: 121 FLLVGKLLAANLQQAIADAMKPLAYSKQLAHGANPHQAHINIAPIATQTTALFNRNNNYV 180

Query: 191 VYLSQPFFFVLFQVLILLITVYAVGIEIKFRTADEWLFVAKGNMVTAVLGKLLPYTIIFI 250
            +L  P    L+Q+  +L+   A+  E++     + +      ++  +  KLL Y  + +
Sbjct: 181 GFLVPPVLIALWQLTAMLVFANALNRELEPSARCDSV-----GLLPRLGAKLLCYMPLLM 235

Query: 251 LIGWLANYVMFGILHIPFQGS--WLLMNMLTALFVVATQALGLFLFSLFPAISLIISIVS 308
           L G   + ++FG L +P   S  WL+  ML  L  V      +FL  L    + ++S  +
Sbjct: 236 LQGLFIHALLFGYLKLPVAASPLWLIPAMLALLLAVFLIVAVIFL--LMQESARVVSFCT 293

Query: 309 MVGSLGATLSGVTFPVPNMYPLVRDASYLFPVRHFTEM-MQNMLYGGSGFIHLWPSAVIL 367
            + +      GVTFPV +M    +    L P  H+ +  +  + YG SG   L  S   +
Sbjct: 294 ALFAPAFAFMGVTFPVQDMPAAAQYWRLLMPSSHYIDSHIALVSYGVSGMELLGKSFTFM 353

Query: 368 CIFPLLALVL 377
              P L L+L
Sbjct: 354 ---PFLLLLL 360