Pairwise Alignments

Query, 394 a.a., conserved hypothetical protein, putative transmembrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 377 a.a., ABC-type multidrug transport system, permease component from Dechlorosoma suillum PS

 Score = 80.9 bits (198), Expect = 6e-20
 Identities = 85/377 (22%), Positives = 157/377 (41%), Gaps = 20/377 (5%)

Query: 1   MSSSQTYSPFRSVLLREWRRMTSRRLYLCVCIILPLFTLFFMATIFGNGQMENIPIGIVD 60
           +S S + S +  +LL+E+ ++   RL   + + +P+  L        N   +++P  IV 
Sbjct: 4   LSHSFSLSRWFGILLKEFIQLKRDRLTFGMIVGIPIIQLLLFGFAI-NSDPKHLPTAIVM 62

Query: 61  QDNTASSRAITRNISAVPTFKVTRHFVNEEAARKAVQKKEIYGYLSIPPKFEQDAISGKN 120
            D    +R+    +     FK+    V+E+ A   + + ++   ++ PP F +D + GK 
Sbjct: 63  ADPGPFARSYVAAMQNSDYFKIVGS-VDEKEANALLDRSQVQFVVTFPPGFHRDLVRGKA 121

Query: 121 ATLSYYYHYA-LLSVGGELMAAFETSLAPVSLSPIVMQAVALGVEQDKITTFLLPVQASN 179
            TL         ++ GG +    +  L        V      G+E+    T   P+    
Sbjct: 122 PTLLVEADATDPMAAGGAISVLNKLGLE-------VFAPDLPGLEK----TATPPLDLRV 170

Query: 180 HPIYNPSLDYSVYLSQPFFFVLFQVLILLITVYAVGIEIKFRTADEWLFVAKGNMVTAVL 239
           H  YNP    S  +      V+  + ++L+T  A+  E + R   E L       V  + 
Sbjct: 171 HRRYNPEGLTSYNVVPGLLGVILTMTMVLMTGLAMTRE-RERGTFENLLATPATPVEVMT 229

Query: 240 GKLLPYTIIFILIGWLANYVMFGILHIPFQGSWLLMNMLTALFVVATQALGLFLFSLFPA 299
           GK++PY +I ++   L       I  +P  G+ LL+  +  LF+ A   LG+   S+   
Sbjct: 230 GKIVPYILIGLIQVTLILLAARFIFDVPMHGNLLLLYAVVLLFICANLTLGITFSSIARN 289

Query: 300 ISLIISIVSMVGSLGATLSGVTFPVPNMYPLVRDASYLFPVRHFTEMMQNMLYGGSGFIH 359
               + +          LSG  FP   M    +    + P+ HF  +++ +L  G+G   
Sbjct: 290 QLQAMQMTFFFFLPSMLLSGFMFPFRGMPEWAQVVGNVLPLTHFLVLVRGILLKGNGIDM 349

Query: 360 LWPSAVILCIFPLLALV 376
           +W S     ++P+LA +
Sbjct: 350 VWSS-----VWPILAFI 361