Pairwise Alignments

Query, 394 a.a., conserved hypothetical protein, putative transmembrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 391 a.a., ABC transporter permease from Ralstonia sp. UNC404CL21Col

 Score =  100 bits (248), Expect = 9e-26
 Identities = 89/388 (22%), Positives = 167/388 (43%), Gaps = 24/388 (6%)

Query: 12  SVLLREWRRMTSRRLYLCVCIILPLFTLFFMATIFGNGQMENIPIGIVDQDNTASSRAIT 71
           SV+L+E+ ++   R+   + I +P+  LF       N   +++  G++  D +  +R+  
Sbjct: 15  SVVLKEFLQLRRDRVTFAMMIGIPIMQLFLFGFAI-NADPKHLLTGVIAADQSEFTRSFL 73

Query: 72  RNISAVPTFKVTRHFVNEEAARKAVQKKEIYGYLSIPPKFEQDAISGKNATLSYYYHYAL 131
            ++     F +T   V+E A R+A+ K ++   +SIPP F +  + G+  +L        
Sbjct: 74  ASMRNSDYFDLTTTLVDETAGREALAKGQLQFVVSIPPDFTRRLVRGEKPSLL------- 126

Query: 132 LSVGGELMAAFETSLAPVSLSPIVMQAVALGVEQ------------DKITTFLLPVQASN 179
             V  +      T LA  SLS +V   V   ++                +    P     
Sbjct: 127 --VEADATDPAATGLAVASLSQLVQGVVNKDMKGALSPLAGGAGAGPSASGAAPPFDVRI 184

Query: 180 HPIYNPSLDYSVYLSQPFFFVLFQVLILLITVYAVGIEIKFRTADEWLFVAKGNMVTAVL 239
           H +YNP       +       +  + ++++T  A+  E + R   E L     + +  + 
Sbjct: 185 HKLYNPEGITQYNIIPGLMGTILTMTMVMMTGLAMTRE-RERGTMENLLATPVHPLEVMT 243

Query: 240 GKLLPYTIIFILIGWLANYVMFGILHIPFQGSWLLMNMLTALFVVATQALGLFLFSLFPA 299
           GK++PY  I ++   +   + F + H+PF GS  ++ +   LF+VA+  +G+ L SL   
Sbjct: 244 GKIVPYIFIGLVQVTIILLMAFFVFHVPFVGSVWMVYVSALLFIVASLTVGITLSSLAQN 303

Query: 300 ISLIISIVSMVGSLGATLSGVTFPVPNMYPLVRDASYLFPVRHFTEMMQNMLYGGSGFIH 359
                 +          LSG  FP   M    +    L P+ +F  + + +L  G+G+  
Sbjct: 304 QLQATQLTFFYFLPNILLSGFMFPFVGMPKWAQVIGNLLPMTYFNRLTRGILLKGNGWFE 363

Query: 360 LWPSAVILCIFPLLAL-VLLPHLKRAIE 386
           LWPS   L +F ++ L V L   +R ++
Sbjct: 364 LWPSIWPLMVFTVVVLGVALRFYRRTLD 391