Pairwise Alignments

Query, 247 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 909 a.a., multidrug ABC transporter ATP-binding protein from Klebsiella michiganensis M5al

 Score =  155 bits (392), Expect = 3e-42
 Identities = 85/222 (38%), Positives = 128/222 (57%), Gaps = 1/222 (0%)

Query: 11  LTKQYGKFTAVDHIRLSIRKGEIFGLLGPNGAGKSTTILMMMGLTEPTSGIVEICGINST 70
           LT ++G F AVDH+   I +GEIFG LG NG GKSTT+ M+ GL   + G   + G    
Sbjct: 274 LTMRFGNFVAVDHVNFRIARGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVD 333

Query: 71  THPIEVKRKIGYLPEDVGFYDDMTGLENLMYTARLNGIPDKEAKVKALELMKRVGLEDQL 130
              IE +R++GY+ +    Y ++T  +NL   ARL  IP  E   +  E+ +R  LE+  
Sbjct: 334 PRDIETRRRVGYMSQAFSLYSELTVRQNLELHARLFHIPKAEIPGRIAEMSQRFMLEEVE 393

Query: 131 KKKTGKYSRGMRQRLGLADVLIKNPEIIILDEPTSGIDPAGVQEFIELIRWLSKEEGLTV 190
                    G+RQRL LA  +I  PE++ILDEPTSG+DP     F +L+  L++++ +T+
Sbjct: 394 DTLPASLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLARQDRVTI 453

Query: 191 LFSSHHLDQAQKVCDRVGLFSNGKILALIDMAELKEKKQELS 232
             S+H +++A++ CDR+ L   GK+LA      L E++   S
Sbjct: 454 FISTHFMNEAER-CDRISLMHAGKVLASDTPQALVEQRGSAS 494



 Score =  111 bits (278), Expect = 4e-29
 Identities = 71/223 (31%), Positives = 127/223 (56%), Gaps = 6/223 (2%)

Query: 8   LTELTKQYGKFTAVDHIRLSIRKGEIFGLLGPNGAGKSTTILMMMGLTEPTSGIVEICG- 66
           L  +++++G   A+  I LSI    + GL+GP+G GKS+ + ++ G      G V + G 
Sbjct: 7   LENVSQRFGATVALKDITLSIPARCMVGLIGPDGVGKSSLLSLISGARVIERGNVMVLGG 66

Query: 67  -INSTTHPIEVKRKIGYLPEDVG--FYDDMTGLENLMYTARLNGIPDKEAKVKALELMKR 123
            +    H  +V  KI ++P+ +G   Y  ++  EN+ + ARL G    E  ++  EL++ 
Sbjct: 67  DMRDVRHRQDVCPKIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAERDIRINELLQS 126

Query: 124 VGLEDQLKKKTGKYSRGMRQRLGLADVLIKNPEIIILDEPTSGIDPAGVQEFIELIRWL- 182
            GL     +  GK S GM+Q+LGL   LI +P+++ILDEPT+G+DP    +F +LI  + 
Sbjct: 127 TGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPQLLILDEPTTGVDPLSRAQFWDLIDNIR 186

Query: 183 SKEEGLTVLFSSHHLDQAQKVCDRVGLFSNGKILALIDMAELK 225
            ++  ++VL ++ ++++A++  D +   + G++LA     ELK
Sbjct: 187 QRQPEMSVLVATAYMEEAERF-DWLVAMNAGEVLATGSADELK 228