Pairwise Alignments

Query, 373 a.a., putative universal stress protein UspA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 147 a.a., UspA domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 60.8 bits (146), Expect = 2e-14
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 13/151 (8%)

Query: 86  KILIPVDFSNYSMKACEFGFNLAKTENSEVILLHVYFTPIYASSLPYGDVFNYQIGDEES 145
           KIL  VDFS +S    ++  +LAK     V++L+       A SL     F+       S
Sbjct: 6   KILCAVDFSEHSKDVADYAASLAKLTGGSVVVLYA------APSLSQYVGFHVP---PNS 56

Query: 146 VKTIIQQVHSDLNALSDKIKEKVASGEFPDIKYSCILREGIPEEEILRYAKEQRPKVIIM 205
           ++  + ++ S     ++K  E   +  FP IK    +  G   EEIL  A ++   VIIM
Sbjct: 57  IENFVGEIVSG----AEKAMESFVAENFPGIKAEGRIVTGYAAEEILGIADKEGADVIIM 112

Query: 206 GTRGKSQKDIDLIGSVTAEIIDRSRTAVLAI 236
           GT G+   D  L GSV  +++  +R  VL I
Sbjct: 113 GTHGRKGLDRILFGSVAEKVVKSARQPVLTI 143



 Score = 22.7 bits (47), Expect = 0.006
 Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 299 IKDYFQKQYPGLEIHYDVVMN---DNLLKGLDKYIKDNQIDIITLTSYKRNIFARLFNPS 355
           ++ +  + +PG++    +V     + +L   DK       D+I + ++ R    R+   S
Sbjct: 72  MESFVAENFPGIKAEGRIVTGYAAEEILGIADK----EGADVIIMGTHGRKGLDRILFGS 127

Query: 356 IARKMIFHSDTPLLVI 371
           +A K++  +  P+L I
Sbjct: 128 VAEKVVKSARQPVLTI 143