Pairwise Alignments

Query, 222 a.a., ABC transporter, permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 270 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  160 bits (405), Expect = 2e-44
 Identities = 84/222 (37%), Positives = 134/222 (60%)

Query: 1   MIIQLFFIGIYLKYLFLWNNPWINFLWVIIMIFVAGQTALVRTQLKRSILLIPISIGFLC 60
           M  QL  +G YLK+LF   + W+N LW+ +M+ V     L   +L ++ L++P+      
Sbjct: 48  MTAQLLLVGFYLKFLFSLESLWVNLLWLSVMLLVGASAILGGARLPKARLMLPLLFSLSL 107

Query: 61  SVVVVGLYFIGVVLQLDNIFSAQYFIPIFGILMGNMLSSNVIALNTYYSGLKREQQLYRY 120
           S++ +    +  +LQ   ++ AQY IP+ G+L+GN LS N++AL   ++  + +Q+ Y+ 
Sbjct: 108 SLLPLLTLLLLALLQPSPVYQAQYLIPLAGMLLGNSLSGNILALQRLFNAFEEKQEDYQG 167

Query: 121 LLGNGATRQEAQAPFIKQAIIKSFSPLIANIAVMGLVALPGTMIGQILGGSSPNVAIKYQ 180
            L  GAT  +A  PFI+ A+ ++ +P IA ++ MGLV LPG M GQILGGS P VA+KYQ
Sbjct: 168 RLALGATPWQAAFPFIQGALQQALAPSIAAMSTMGLVTLPGMMTGQILGGSDPLVAVKYQ 227

Query: 181 MMIMVITFTASMLSLMITISLASRRSFDAYGKLLEVTKETKK 222
           ++IM+       +S+   +SLA R+  +  GKLL  + E+ K
Sbjct: 228 VVIMLAILVMQSMSVASALSLAVRQCLNHSGKLLIKSVESIK 269