Pairwise Alignments

Query, 371 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 477 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  117 bits (293), Expect = 7e-31
 Identities = 108/394 (27%), Positives = 165/394 (41%), Gaps = 73/394 (18%)

Query: 36  LPAEWHLQSGIQLTWPHAGTDWAYMLKEVQECFVNIAREIAKRELLLIVTPEPEEVKKQI 95
           +PAE+   + I + +P       Y  + VQ+  V       K + LL    EPEE  K I
Sbjct: 67  MPAEFEPITSIWMAYPTYENQAGYPSQTVQKAMVKAIAPTVKIDFLL---NEPEE--KVI 121

Query: 96  V------ATVNMDNVRFLRCETNDTWARDHGAITMIDTGNPSLLDFTFNGWGLKFASELD 149
           +      A +    VR+      D W RD G I  ++     ++DF FN W    A++  
Sbjct: 122 INGWLKTAGIPASQVRYHLVPHEDLWIRDMGPIFAVNADQTQVVDFGFNAWSYLAATDPA 181

Query: 150 NLITGQAVK--AGALKGQYIDCLDFVLEGGSIESDGMGTLLTTTECLLSPHRNGKLNQVE 207
            +   Q  +  AG L    +     + EGG+ E +G GTL+ T    L   RN  L + +
Sbjct: 182 AMTDEQVDRKVAGDLDLPILRS-SLISEGGNREFNGKGTLMLTEAVEL--QRNPGLTKEK 238

Query: 208 IEEYLKSTFHLQKVLWLDHGYLAGD---------------DTDSHIDTLARFCSTDTI-- 250
           IE  LK  F+L+KV+WL  G +  +                T  HID  ARF  ++TI  
Sbjct: 239 IETELKRVFNLKKVIWLQEGVIDDELSYRGKLPDGSLTVLATGGHIDEYARFVDSNTILL 298

Query: 251 AYVKCDNTEDEHYEALH--AMEEQLKTFRTLA---GEPYRLLALPMADKVE--------- 296
           A V  +    +   A++   +EE LK  +      G+P+R++ +P A  +          
Sbjct: 299 AEVTAEERASDPLAAINYQRLEENLKILQAATDQDGKPFRIVRIPAAKPIYVNMTKEDAV 358

Query: 297 ---------EDG----------ERLPATYANFLIMNDAILYPTYQQPD-------NDRKA 330
                    EDG            L A+Y NF+I ND ++ P Y QPD        D+ A
Sbjct: 359 FQALQELTFEDGTVIQDDDQIKTILAASYLNFVIANDVVIVPRYWQPDRNLEYQQKDQAA 418

Query: 331 GEVLQQAFPKHQVIGIDCRALIKQHGSLHCVTMQ 364
               Q  FP  +++ I+   +    G +HC+  Q
Sbjct: 419 LAAFQSVFPNKKIVAINPENINAGGGGMHCIVQQ 452