Pairwise Alignments

Query, 371 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 376 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  320 bits (820), Expect = 4e-92
 Identities = 155/352 (44%), Positives = 218/352 (61%), Gaps = 3/352 (0%)

Query: 21  FGKNMTVQVEMRAPHLPAEWHLQSGIQLTWPHAGTDWAYMLKEVQECFVNIAREIAKREL 80
           F   +  Q +      PAEW  Q G+ + WPHA +DW  +L +V   + ++A  + + E 
Sbjct: 24  FASQIMSQGQQSDRRFPAEWEAQDGVLIAWPHADSDWRSLLDQVDRVYRDLAEAVTRFEQ 83

Query: 81  LLIVTPEPEEVKKQIV-ATVNMDNVRFLRCETNDTWARDHGAITMIDTGNPSLLDFTFNG 139
           LLIVTPEP+ V +Q+   T N D ++ +   TNDTW+RD G +T+       LLD+ FNG
Sbjct: 84  LLIVTPEPDRVAEQLAQTTANCDRIQIVELPTNDTWSRDFGPLTVETPAGLRLLDWGFNG 143

Query: 140 WGLKFASELDNLITGQAVKAGALKGQYIDCLDFVLEGGSIESDGMGTLLTTTECLLSPHR 199
           WGLKFA+  DN +T +  + G      ++ +  + EGGSIESDG GTLLTT++CLL  +R
Sbjct: 144 WGLKFAANHDNQVTRRLWQQGIFGTTPLETVPLIFEGGSIESDGRGTLLTTSQCLLEANR 203

Query: 200 NGKLNQVEIEEYLKSTFHLQKVLWLDHGYLAGDDTDSHIDTLARFCSTDTIAYVKCDNTE 259
           N  L++  I + ++      ++LWL+HG+L GDDTD+HIDTL R    DT+ YV CD+  
Sbjct: 204 NPGLSREAIAQIIQRQLGGDRLLWLEHGHLEGDDTDAHIDTLVRIAPNDTLIYVACDDPS 263

Query: 260 DEHYEALHAMEEQLKTFRTLAGEPYRLLALPMADK-VEEDGERLPATYANFLIMNDAILY 318
           D H   L A+E +LK  R   G+PY L+ LP      + DG+RLP TYAN+L++N A+L 
Sbjct: 264 DSHAAELTALEAELKALRAADGQPYHLIPLPWPQPCFDADGQRLPTTYANYLVINGAVLV 323

Query: 319 PTYQQPDNDRKAGEVLQQAFPKHQVIGIDCRALIKQHGSLHCVTMQYPSGVI 370
           PTY  P  D  A   +  AFP    IGI+CR L++QHGSLHC+TMQ P+G++
Sbjct: 324 PTYNDP-ADEAAIAAIAAAFPDRLAIGINCRPLLEQHGSLHCITMQLPAGLL 374