Pairwise Alignments

Query, 241 a.a., putative RNA methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 247 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  139 bits (349), Expect = 7e-38
 Identities = 85/233 (36%), Positives = 120/233 (51%), Gaps = 4/233 (1%)

Query: 10  FQFKQFTVWHDKCAMKVGTDGVLLGAWASVQGAHRILDIGTGTGLVALMLAQRSLPDANI 69
           F FK F V    C M V TD VLLGAWA++ GA  +LD+G G+GL+ALM AQR    A I
Sbjct: 17  FSFKAFHVDDFGCGMPVSTDAVLLGAWANLDGADAVLDLGAGSGLLALMAAQRC--KAPI 74

Query: 70  VALEIDEAAAGQAKENVARSPWKDRIEVVKQDFLFYQ--SPDKFDVIVSNPPYFVDSLSC 127
            A+EID  AA   + N + SPW DRI +++ D    +  +   F  I+ NPPYF      
Sbjct: 75  TAIEIDPVAASACRSNFSASPWPDRINLIEADATDAEALAGKVFTHILCNPPYFETGPLS 134

Query: 128 PDQQRSMARHNDSLTYEKLLKGVADLLKKEGTFTIVIPTDVADRVKTAASEYHLYATRQL 187
               R+ ARH  SL +  L K +   L  EG  ++V+P +     + A +   L   +++
Sbjct: 135 EKPGRAQARHTGSLGFLALCKLITTHLSTEGIASLVLPVESEQAFRQALTHLGLGIRQRV 194

Query: 188 NVITKPGGTPKRMLITFTFNNEGCIKEELLTEVARHQYSEEYKELTREYYLHL 240
            V T  G  P+R+L+  +   +    E L        Y+E    LTR++YL L
Sbjct: 195 EVSTVEGKAPRRLLLAVSQGEDSYQHEHLAIRDVHGCYTEAMTALTRDFYLKL 247