Pairwise Alignments

Query, 182 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 182 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) from Shewanella loihica PV-4

 Score =  172 bits (435), Expect = 4e-48
 Identities = 90/183 (49%), Positives = 120/183 (65%), Gaps = 2/183 (1%)

Query: 1   MNYIQTEIDGVWLIEPNVYSDERGYFMEAFKKEEFEAKIGPVDFVQDNESKSSFGVLRGL 60
           M  + T I  V L+EP V+ DERG F E F+++ F+  +  +DFVQ+N+S S  G LRGL
Sbjct: 1   MKILNTSIPDVKLLEPQVFGDERGCFFETFRQQWFKEHLMDLDFVQENQSHSLQGTLRGL 60

Query: 61  HYQKGEYSQAKLVRVLKGKVLDVAVDLRRSSPTFGKHVSALLSEENKRQFFIPRGFAHGF 120
           HYQ  +  Q KL+RV+ G++ DV VDLRR+SP+FG+     LS +NK Q ++P GFAHGF
Sbjct: 61  HYQLRQ-PQGKLIRVVSGEIFDVCVDLRRTSPSFGQWTGHHLSADNKHQLWVPPGFAHGF 119

Query: 121 VVLSEEAVFMYKVDNKYAPQAEASIVYNDETLGIDW-MLGESQMLLSPKDKEGMAFRDAV 179
            V+S EA   YK  + YAP  E SI ++D+TL IDW +L     LLSPKDK    F +A 
Sbjct: 120 YVVSPEAHCFYKCTDYYAPNDEHSIRWDDDTLAIDWPLLSTQSPLLSPKDKAAGTFAEAD 179

Query: 180 YFE 182
           Y+E
Sbjct: 180 YYE 182