Pairwise Alignments

Query, 182 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 181 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) from Shewanella loihica PV-4

 Score =  171 bits (434), Expect = 5e-48
 Identities = 92/181 (50%), Positives = 118/181 (65%), Gaps = 4/181 (2%)

Query: 1   MNYIQTEIDGVWLIEPNVYSDERGYFMEAFKKEEFEAKIGP--VDFVQDNESKSSFGVLR 58
           M  I T+I  V +IEP V+ DERG+FME + ++ FE  +      FVQDN SKS  G+LR
Sbjct: 1   MKIIDTKIPDVKIIEPTVFGDERGFFMETWNQKRFEELVTGKHTQFVQDNHSKSKKGILR 60

Query: 59  GLHYQKGEYSQAKLVRVLKGKVLDVAVDLRRSSPTFGKHVSALLSEENKRQFFIPRGFAH 118
           GLHYQ  E +Q KLVRV+ G+V DVAVD+R+ SPTFGK V   LS EN RQ ++P GFAH
Sbjct: 61  GLHYQT-ENTQGKLVRVIYGEVFDVAVDIRKGSPTFGKWVGEYLSAENNRQLWVPEGFAH 119

Query: 119 GFVVLSEEAVFMYKVDNKYAPQAEASIVYNDETLGIDWMLGESQMLLSPKDKEGMAFRDA 178
           GF V SE A F+YK  + Y P  E SI ++D+ L I+W   ES+ +LS KD   +   + 
Sbjct: 120 GFYVTSEHAEFVYKCTDYYNPHMECSIQWDDKFLSIEWPF-ESEPILSSKDSNCLGMNEQ 178

Query: 179 V 179
           V
Sbjct: 179 V 179