Pairwise Alignments

Query, 182 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 183 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) from Shewanella sp. ANA-3

 Score =  177 bits (448), Expect = 1e-49
 Identities = 93/183 (50%), Positives = 121/183 (66%), Gaps = 4/183 (2%)

Query: 1   MNYIQTEIDGVWLIEPNVYSDERGYFMEAFKKEEFEAKIG--PVDFVQDNESKSSFGVLR 58
           M  I T+I  V +IEP V+ DERG+FME + +++FE  +      FVQDN SKS  G+LR
Sbjct: 1   MKIINTKIPDVKVIEPKVFGDERGFFMETWNQKQFENLVTGKSTTFVQDNHSKSKRGILR 60

Query: 59  GLHYQKGEYSQAKLVRVLKGKVLDVAVDLRRSSPTFGKHVSALLSEENKRQFFIPRGFAH 118
           GLHYQ  + +Q KLVRV+ G+V DVAVD+R+ SPTFG+ V   LS ENKRQ +IP GFAH
Sbjct: 61  GLHYQTKD-TQGKLVRVISGEVFDVAVDIRKDSPTFGQWVGEYLSAENKRQLWIPEGFAH 119

Query: 119 GFVVLSEEAVFMYKVDNKYAPQAEASIVYNDETLGIDWMLGESQ-MLLSPKDKEGMAFRD 177
           GF V+S E  F+YK    Y P  E  +++ND  L IDW + E++ +LLS KD  G+ F  
Sbjct: 120 GFYVISNECEFVYKCTKYYNPNYEKCLIWNDSNLQIDWPIPETERVLLSSKDSNGIPFDK 179

Query: 178 AVY 180
             Y
Sbjct: 180 IQY 182