Pairwise Alignments

Query, 252 a.a., putative tRNA/rRNA methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 267 a.a., rRNA methylases from Sphingomonas koreensis DSMZ 15582

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 77/253 (30%), Positives = 119/253 (47%), Gaps = 27/253 (10%)

Query: 7   IKYIHSLELKKTRKEEQVFLAEGPKLTGDL--LGHFPCRFLAAT-------SSWLQAHPD 57
           +K + SL  KK R++E +FLAEG ++  +    GH P     A        +  L A  +
Sbjct: 12  VKRVRSLRDKKHRRDEGLFLAEGLRILTEAREAGHLPEYLFFAKGHDTHPLAGELIAATE 71

Query: 58  IQANEIAEVSQEELSRASLLKTPQQVLAVFEQPQYTLSPDFAR-----QSLCLALDDIQD 112
               E+     + LS+ S    P  V+ V+ +    LS D AR       + L  + ++D
Sbjct: 72  AAGGEVISTDSDILSKLSGKDNPGAVVGVYRE----LSTDLARLDRNAAQIWLVAERLRD 127

Query: 113 PGNLGTIIRLADWFGIEHIICSQNTVDVYNPKTIQATMGGIARVKVHYTSLPEFIHS--- 169
           PGNLGTI+R AD  G   +I     VD ++ + ++A+MG +  + +      EF HS   
Sbjct: 128 PGNLGTILRTADAVGAGGLILVDECVDPFSVEAVRASMGALFTIPLARAPWDEF-HSWLR 186

Query: 170 LGDAPVFGTFLDGENMYEQP-LSTNGLIVMGNEGNGIGKEVEALINRKLYIPNYPQGKET 228
            G   + G  L+G   Y  P  S    +  GNE  G+     A  + ++ IP    GK  
Sbjct: 187 AGPGQLVGLALEGAVDYRAPDFSAPVFLFTGNEAQGLPPAYAAACDVRVKIPML--GK-- 242

Query: 229 SESLNVAIATAVI 241
           ++SLN A+ATAV+
Sbjct: 243 ADSLNAAVATAVM 255