Pairwise Alignments

Query, 278 a.a., phosphomethylpyrimidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 259 a.a., hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase from Sphingomonas koreensis DSMZ 15582

 Score =  171 bits (434), Expect = 1e-47
 Identities = 100/264 (37%), Positives = 149/264 (56%), Gaps = 17/264 (6%)

Query: 5   PVILSIAGSDCSGGAGIQADIKTISALGGYAASAITAVTVQNTLGVRAVHAIPPEIVCGQ 64
           P IL IAGSD  GGAGIQADIKT++ LGG+A +AI A+T QNTLGV AVH +P ++V  Q
Sbjct: 3   PRILIIAGSDSGGGAGIQADIKTVTMLGGHAMTAIAAITAQNTLGVTAVHPVPVDMVLAQ 62

Query: 65  IEAVMEDLQPVAIKIGMVNDIQIVHVIADCIRKYSPEHIIYDPVMVSTSGRKLMTNEAIE 124
           I+AV+ D+   A+KIGM+    I + +A  +       +++DPVM++TSG  L   + I 
Sbjct: 63  IDAVVSDIGVDAVKIGMIGSADIANAVAHRLEALPGVPVVFDPVMIATSGSILADADTIA 122

Query: 125 EIKKELLPLVTLVTPNIDEAKVLTGKSIQNTQDMLEAAKQLSDSYQIHILIKGGHLEGDQ 184
             ++ L+ L  +VTPN+ E + L G+                  +  H+  KGGH EG+ 
Sbjct: 123 AFER-LMRLAAVVTPNLPELEALGGRDAVL-------------GHGCHLAEKGGHAEGEC 168

Query: 185 MCDLLYSPDHTYYIYE-EKKIESKNLHGTGCTLSSAIASYLAKGYSMKESIRHAKEYITH 243
           + D L++P         E + ++ + HGTGC+ +SA+A+ L  G  + ++   A  Y+  
Sbjct: 169 VHDQLFAPGGARVAETVEPRFDTLHTHGTGCSFASALATGLGAGLPVAQAFTRAVRYVRA 228

Query: 244 AIIAGKDLNIGHGNGPLWHFPDSI 267
           AI     L  GH  GP+ H   S+
Sbjct: 229 AIRHAPGLGAGH--GPIGHALGSV 250