Pairwise Alignments

Query, 311 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 320 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 60/242 (24%), Positives = 94/242 (38%), Gaps = 28/242 (11%)

Query: 62  GGMKQFIKPGQKVVVKPNIGWDKVPELAGNTNPKLITEIIKQCFATGAKEVTVFDHTCDD 121
           GGM  F+KPGQKV++KPN+     P     T P L+  I +     G +           
Sbjct: 30  GGMAAFVKPGQKVLLKPNLLTGNRPGKECVTRPDLVAAIARLVRQVGGEPFLGDSPAFGS 89

Query: 122 WQKCYKNSGIEAAAKEAGAKVMPAHLESYYKPVDLPKGQKMKKAKIHEAILNCDVWINVP 181
            +     SG     +E    ++        +  D P  Q +   ++    L  DV IN+P
Sbjct: 90  AKGVAIASGYGPMLEELDIPLV--EFRGVRQSTDSPTFQHL---RLSREALGADVVINIP 144

Query: 182 ILKNHGGANLTISMKNHMGIV------W-------DRGFFHQNDLQQCIADICTLEKKAV 228
            LK+H    L+  +KN  G V      W       DR  F +  ++   A          
Sbjct: 145 KLKSHVQLTLSAGVKNLFGCVPGKMKAWWHLEAGKDRDRFGEMLVETARA------ISPA 198

Query: 229 LNVVDAYRIMKTNGPRGRSASDVVLAKGLFISPDIVAVDTAAAKFFNQIREMPLDTVGHL 288
           L ++DA    + NGP       + L   L  + D+ A+D A A     + E+ + T+   
Sbjct: 199 LTILDAIVAHEGNGPSNGEPRSLKL---LAAADDVFALDQACATLLG-LNELAVPTLAAA 254

Query: 289 AK 290
           A+
Sbjct: 255 AR 256