Pairwise Alignments

Query, 670 a.a., 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 774 a.a., glycogen branching enzyme from Synechococcus elongatus PCC 7942

 Score =  177 bits (450), Expect = 1e-48
 Identities = 162/621 (26%), Positives = 274/621 (44%), Gaps = 88/621 (14%)

Query: 61  GWTFREWAPNATHIYMVGTFNNWEEKAAYKLKKLKNGNWEINLPADAIHHGDLYKLNVYW 120
           G  F  WAP+A ++ ++G FN+W+ +  +++ +  NG WE+ +P   +     Y++  Y 
Sbjct: 147 GVNFAVWAPSARNVSILGDFNSWDGR-KHQMARRSNGIWELFIPELTVGAAYKYEIKNY- 204

Query: 121 DGGQGERIPAWATRVVQDEQTKIFSAQV----WAPEKPYKFKKKTFKPTTNPLLIYECHI 176
           DG   E+   +  +     +T    A +    W  +  +  +++  +P   P+ +YE H+
Sbjct: 205 DGHIYEKSDPYGFQQEVRPKTASIVADLDRYTWG-DADWLERRRHQEPLRQPISVYEVHL 263

Query: 177 G--MAQQEEKVG-----------------------TYNEFREKTLPRIAQEGYNCIQIMA 211
           G  M    + +                        TY E  ++ +P +   GY+ I+++ 
Sbjct: 264 GSWMHASSDAIATDAQGKPLPPVPVADLKPGARFLTYRELADRLIPYVLDLGYSHIELLP 323

Query: 212 IQEHPYYGSFGYHVSSFFAASSRFGTPDELKALIDAAHEMGIAVIMDIVHSHAVKNEVEG 271
           I EHP+ GS+GY V+ ++AA+SR+G+P++    +D  H+ GI VI+D V  H  K +  G
Sbjct: 324 IAEHPFDGSWGYQVTGYYAATSRYGSPEDFMYFVDRCHQNGIGVILDWVPGHFPK-DGHG 382

Query: 272 LGNFAGDPNQYFYPAPRREHPAWDSLCFDYGKNEVIHFLLSNCKYWLEEYKFDGFRFDGV 331
           L  F G        + + EH  W +L F+YG++EV +FL +N  +W ++Y  DG R D V
Sbjct: 383 LAFFDGTHLYEHADSRQGEHREWGTLVFNYGRHEVRNFLAANALFWFDKYHIDGIRVDAV 442

Query: 332 TSMLY--YSHGLGEAFCNYGDYFNGHQDGNAICYLTLANELIHQVNPKAISIAEEVSGMP 389
            SMLY  Y+   GE   N    + G ++  A  +L   N LI    P A+SIAEE +  P
Sbjct: 443 ASMLYLDYNRKEGEWIPN---EYGGRENIEAADFLRQVNHLIFSYFPGALSIAEESTSWP 499

Query: 390 GLAAKVEDGGYGFDYRMAMNIPDYWIKTIKEKIDED-WKPSSMFWEVTNR--RQDEKTIS 446
            ++     GG GF+ +  M     W+  + +    D W        VT        +   
Sbjct: 500 MVSWPTYVGGLGFNLKWNMG----WMHDMLDYFSMDPWFRQFHQNNVTFSIWYAFSENFM 555

Query: 447 YAESHDQALVGDKTIIFRLIDADMYWHMQKGDE-NYVVNRGIALHKMIRLLTSSTINGGY 505
            A SHD+ + G   +I ++           GDE     N    L  M       T  G  
Sbjct: 556 LALSHDEVVHGKSNLIGKM----------PGDEWQKFANLRCLLGYMF------THPGKK 599

Query: 506 LNFMGNEFGHPEWIDFPREGNGWSCKYARRQWDLVDNKNLAYHYMGDFDAEMLKVIKSVK 565
             FMG EFG  +W     E N W       +W L+  +   +  +  F  ++  + ++  
Sbjct: 600 TLFMGMEFG--QW----AEWNVW----GDLEWHLLQYE--PHQGLKQFVKDLNHLYRNAP 647

Query: 566 DFQATPVQEI---WHNDGD---QVLAYGRKD------LIFVFNFNPKQSFVDYGFLVS-P 612
              +    +    W +  D    ++++ R+       L+ V NF P Q    Y   V   
Sbjct: 648 ALYSEDCNQAGFEWIDCSDNRHSIVSFIRRAHESDRFLVVVCNFTP-QPHAHYRIGVPVA 706

Query: 613 GAYEVILNTDNVAFGGNGLAD 633
           G Y  I N+D  ++GG+ + +
Sbjct: 707 GFYREIFNSDARSYGGSNMGN 727