Pairwise Alignments

Query, 670 a.a., 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 765 a.a., glycogen branching enzyme (RefSeq) from Shewanella loihica PV-4

 Score =  199 bits (506), Expect = 4e-55
 Identities = 185/666 (27%), Positives = 310/666 (46%), Gaps = 97/666 (14%)

Query: 16  PFA-DAITGRHQYA--LNKEA-ELTNKGKQTLSDFASGYLYFGLHRTP----KGWTFREW 67
           PF+ + I   +QYA  L+ EA  L ++G+Q        Y + G +        G  F  W
Sbjct: 120 PFSVEEINDPYQYASLLSDEALYLFSEGRQE-----QAYRFMGANWREVDGVSGVQFCVW 174

Query: 68  APNATHIYMVGTFNNWEEKAAYKLKKLKNGNWEINLPA-DAIHHGDLYKLNVYWDGGQGE 126
           APNA  + +V    +W+ +         NG WEI +P+  A+ H   YK  +     +GE
Sbjct: 175 APNAKRVSLVHDAIDWDGRRQVMRHHPANGVWEIFIPSMKALTH---YKYEIVTQ--EGE 229

Query: 127 RIPAWATRVVQDEQTKIFSAQVWAPEKPYKFKKKTFKPTT-------NPLLIYECHIGMA 179
           R+   A    +  Q    +A +  P+  Y ++ K +            P+ IYE H+G  
Sbjct: 230 RLLK-ADPFGRAMQGAPGNASIVPPQLDYAWQDKRWLAKRAKQSWHDQPISIYEVHLGSW 288

Query: 180 QQEEKVG----TYNEFREKTLPRIAQEGYNCIQIMAIQEHPYYGSFGYHVSSFFAASSRF 235
           +++ + G    +Y++  ++ +P + + GY  +Q+M + E+P+ GS+GY     FA + RF
Sbjct: 289 RRQGENGEQYLSYSQLIDQLIPYVVEMGYTHLQLMPLCEYPFDGSWGYQPVGLFAPTHRF 348

Query: 236 GTPDELKALIDAAHEMGIAVIMDIVHSHAVKNEVEGLGNFAGDPNQYFYPAPRR-EHPAW 294
           G P ELKA +DA H+ GI VI+D V +H  K +  GL  F G    Y +  PR+ EHP W
Sbjct: 349 GQPHELKAFVDACHQAGIGVILDWVAAHFPK-DPHGLTRFDGS-CLYEHEDPRQGEHPDW 406

Query: 295 DSLCFDYGKNEVIHFLLSNCKYWLEEYKFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNG 354
           D+L ++YG+ EV  +LLSN  YWL+E+  DG R D V+SMLY  +   E      +   G
Sbjct: 407 DTLIYNYGRGEVQSYLLSNAHYWLQEFHLDGLRLDAVSSMLYLDYS-REPHQWLPNAHGG 465

Query: 355 HQDGNAICYLTLANELIHQVNPKAISIAEEVSGMPGLAAKVEDGGYGFDYRMAMNIPDYW 414
            ++ +AI +L   N  ++Q  P  + IAEE +  PG+  +V++GG GF ++  M   +  
Sbjct: 466 RENLDAIAFLQDLNTRLYQGFPGIMMIAEESTAWPGVTKRVDEGGLGFGFKWNMGWMNDS 525

Query: 415 IKTI-KEKIDEDWKPSSMFWEVTNRRQDEKTISYAESHDQALVGDKTIIFRLIDADMYWH 473
           +  I ++ I      + + + +     ++  +S   SHD+ + G  +++ ++   D  W 
Sbjct: 526 LNYIGRDPIHRSHHHNELTFSLMYCFTEQFILSL--SHDEVVHGKGSLLHKIPGDD--W- 580

Query: 474 MQKGDENYVVNRGIALHKMIRLLTSSTINGGYLNFMGNEFGHPEWIDFPREGNGWSCKYA 533
                + +   R                   YL FM   +GHP      ++       +A
Sbjct: 581 -----QKFATLR------------------AYLGFM---WGHP-----GKKLLFMGADFA 609

Query: 534 RR-QWDLVDNKNLAYHYMGDFDAEMLKVIKSVKDFQATPVQEI-------------W--- 576
           +R +WD     +L +H +     + ++  + VKD  +   Q +             W   
Sbjct: 610 QRDEWD--HQHSLDWHLLAFEPHQGMQ--RWVKDLNSLYRQSVALYGDDHHGEGFSWLDC 665

Query: 577 HNDGDQVLAY----GRKDLIFVFNFNPKQSFVDYGFLVSPGAYEVILNTDNVAFGGNGLA 632
            N    VL++    G K LIF+ N  P+        L  PG Y   LN+D+  +GG+ + 
Sbjct: 666 DNASASVLSFIRQSGDKQLIFIVNMTPEVYREFRIGLPQPGRYHERLNSDSHYYGGSDVG 725

Query: 633 DDSVVH 638
           +  V+H
Sbjct: 726 NQGVIH 731