Pairwise Alignments

Query, 426 a.a., serine hydroxymethyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 417 a.a., serine hydroxymethyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  464 bits (1194), Expect = e-135
 Identities = 242/421 (57%), Positives = 308/421 (73%), Gaps = 16/421 (3%)

Query: 4   DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVV 63
           D  +F  I++E +RQ + IELIASEN+ S +VM+A GS LTNKYAEGYPGKRYYGGCE V
Sbjct: 12  DPQLFQAIQEETRRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYPGKRYYGGCEHV 71

Query: 64  DQSEQIAIDRLKEIFGAEWANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSHGS 123
           D  E +AI+R KE+FGA +ANVQPHSG+QAN+AV++A+L PGD  +G+NLAHGGHL+HGS
Sbjct: 72  DIVENLAIERAKELFGATYANVQPHSGSQANSAVYMALLQPGDTVLGMNLAHGGHLTHGS 131

Query: 124 LVNTSGIIYTPCEYNLNQETGRVDYDQMEEVALREKPKMIIGGGSAYSREWDYKRMREIA 183
            VN SG +Y    Y ++ E+G++DYD+ME +A+  KPKM+IGG SAYS   D+ RMREIA
Sbjct: 132 PVNFSGKLYNIVPYGID-ESGKIDYDEMERLAVEHKPKMMIGGFSAYSGIVDWARMREIA 190

Query: 184 DKVGAILMIDMAHPAGLIAAGLLENPVKYAHIVTSTTHKTLRGPRGGVIMMGKDFPNPWG 243
           DK+GA L +DMAH AGLIAAG+  NPV +AH+VTSTTHKTL GPRGG+I+   +  + + 
Sbjct: 191 DKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIILSAANDEDLYK 250

Query: 244 KKTPKGEIKMMSQLLDSAVFPGVQGGPLEHVIAAKAVAFGEILQPEYKEYAKQVQKNAAI 303
           K             L+SAVFPG QGGPL HVIA KAVAF E L PE+KEY +QV  NA  
Sbjct: 251 K-------------LNSAVFPGGQGGPLMHVIAGKAVAFKEALSPEFKEYQQQVVVNAKA 297

Query: 304 LAQALIDRGFTIVSGGTDNHSMLVDLRSKYPDLTGKVAEKALVSADITVNKNMVPFDSRS 363
           +A   I+RGF +VSGGT+NH  L+DL +K  D+TGK A+ AL  A+ITVNKN VP D RS
Sbjct: 298 MANTFIERGFDVVSGGTENHLFLLDLIAK--DITGKDADAALGRANITVNKNSVPNDPRS 355

Query: 364 AFQTSGIRLGTPAITTRGAKEDLMIEIAEMIETVLSNVENEEVIAQVRARVNETMKKYPL 423
            F TSG+R+G+PAIT RG KE   +E+   I  VL ++ NE  I +V+ +V E   K+P+
Sbjct: 356 PFVTSGLRIGSPAITRRGFKEAEAVELTNWICDVLDDINNEATIERVKNQVLELCAKFPV 415

Query: 424 F 424
           +
Sbjct: 416 Y 416