Pairwise Alignments

Query, 338 a.a., putative mRNA-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 317 a.a., NAD-dependent dehydratase from Azospirillum brasilense Sp245

 Score = 60.5 bits (145), Expect = 6e-14
 Identities = 72/303 (23%), Positives = 118/303 (38%), Gaps = 33/303 (10%)

Query: 1   MKALFIGGTGTISTDVVELAQQRGWEI-TLLNRGSKKLPEGVGSI-IADIHDEEAVAKAI 58
           M+ L  G TG ++  V+ L  +RG  +  ++ R    +P    ++ I DI    A   A+
Sbjct: 1   MRVLVTGATGFVARTVIPLLVERGHSVRAVVRRPDIPVPHAADTVTIGDIGPATAWGNAL 60

Query: 59  ADESYDVVAQFIA--YTAEDVERD-IRLFRNKT----------------KQYIFISSASA 99
             +  D V    A  +   D E D +  FR                   K+ +++SS  A
Sbjct: 61  --QGMDAVVHLAARVHVMRDRESDPLAAFRRVNTAGTRVLAEAAAAAGVKRMVYLSSVKA 118

Query: 100 YQKPLADYRITESTPLVNPYWQYSRHKIAAEEVLMTAYRTTGFPITIVRPSHTYNGTKPP 159
                    ++E T   +P+  Y   K+ AE  L      TG    ++RP   Y      
Sbjct: 119 LADESRPDELSEETE-PDPHSPYGISKLEAERALAEISARTGLEAVVIRPPLVYGP---- 173

Query: 160 VSLHGNKGNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGLMANPHAIGNAFHI 219
               G  GN+  L + +D    +  G   +  +L    + A      + +P A G  F +
Sbjct: 174 ----GVGGNFLRLMQAVDRGIPLPLGALENRRSLIFVGNLADAIQECLTHPQAAGGRFLV 229

Query: 220 TTDESMTWNQIYQTIADALGKPLNALHVASDFLARHGGNYDFRGELLGDKAATVVFDNSK 279
                M+  ++ + IA+ALGKP   L V    LA        R  +L   A ++V D+  
Sbjct: 230 HDGRPMSTAELVRAIAEALGKPARLLPVPPSLLAL-AARLARREAMLDRVAGSLVIDDGA 288

Query: 280 IKR 282
           I+R
Sbjct: 289 IRR 291