Pairwise Alignments

Query, 338 a.a., putative mRNA-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 216 a.a., Nucleoside-diphosphate-sugar epimerase-like from Synechococcus elongatus PCC 7942

 Score = 43.1 bits (100), Expect = 6e-09
 Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 13/171 (7%)

Query: 1   MKALFIGGTGTISTDVVELAQQRGWEITLLNRGSK---KLPEGVGSIIADIHDEEAVAKA 57
           M+ L +G TG     VVE A   G  +  L R +     LPEGV  ++ D+ D  ++  A
Sbjct: 1   MRVLVVGATGRTGRCVVETAIAAGHSVRALVRSANPQPPLPEGVELVVGDLSDRASLEAA 60

Query: 58  IADESYDVVAQFIAYTAE-DVERDIRLFRNKTKQYIFISSASAYQKPLADYRITESTPL- 115
           +A    D V      T   D     ++    T Q I ++ A+  Q+ +    +  S  L 
Sbjct: 61  LA--GMDAVISAAGATPNLDPLGPFKVDYLGTTQLIDLAGAAGIQRFVLVSSLCVSRLLH 118

Query: 116 -VNPYWQYSRHKIAAEEVLMTAYRTTGFPITIVRPSHTYNG-TKPPVSLHG 164
            +N +W     K  AE  L    +++G   TIVRP    +  T+ P+ L G
Sbjct: 119 PLNLFWLVLFWKRRAERYL----QSSGLSYTIVRPGGLRSDRTRVPLKLTG 165