Pairwise Alignments

Query, 245 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 238 a.a., two component heavy metal response transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  199 bits (507), Expect = 3e-56
 Identities = 103/226 (45%), Positives = 148/226 (65%), Gaps = 3/226 (1%)

Query: 17  KQCRFMAKILLAEDEVNIASFIERGLKEFGHSVTVCHDGNTGWRILQEEPFDLVILDIIM 76
           K CR M +IL+ EDE+ I  ++++GL+E G+++++C +G  G+     E FDL+ILD+++
Sbjct: 9   KACRQM-RILVIEDEIKIGDYLKKGLEEAGYTISLCRNGLDGYHCAISEHFDLIILDVML 67

Query: 77  PKINGLELCHLYRQMFGYQAPVIMLTALGTTEDIVKGLDAGADDYLVKPFSFQELEARIK 136
           P +NG ++    R +     PV+ LTA  + ED + GL++GADDYLVKPF+F EL AR+K
Sbjct: 68  PDMNGWQILEKIR-LNNSDIPVMFLTAKDSLEDKINGLESGADDYLVKPFAFAELLARVK 126

Query: 137 ALLRRN-KETVTNQLTCDNLVLDCNTRRAKRGDADIDLTVKEYRLLEYFMTHQGVALSRI 195
            LLRR  K+  ++ LT   L LD   RRA R    + LT KE+ LLE  + HQG  L+R 
Sbjct: 127 TLLRRGTKQLQSDTLTLHGLKLDITKRRASREQTKLHLTNKEFSLLELLVRHQGEVLTRS 186

Query: 196 TLLKDVWDKNFDTNTNIVDVYVNYLRVKIDRDFDKKLIHTVVGLGY 241
            +   VWD NFD++TN++DV +  LR K+D  F  KLIHTV G+GY
Sbjct: 187 FIASQVWDMNFDSDTNVIDVAIRRLRAKVDDPFSVKLIHTVRGMGY 232