Pairwise Alignments

Query, 1041 a.a., cation efflux system protein czcA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1076 a.a., heavy metal efflux pump, CzcA family from Sphingomonas koreensis DSMZ 15582

 Score =  621 bits (1602), Expect = 0.0
 Identities = 369/1055 (34%), Positives = 576/1055 (54%), Gaps = 47/1055 (4%)

Query: 5    IDNIVAFSLKNKFFIFFCTVIAVIAGAVSFKHTPIDAFPDVTNTKVTIITQWAGRSAEEV 64
            I+ IV F+++ ++F+   T+IA + GAVS    PIDA PD+TN +V I  +    S E V
Sbjct: 2    IERIVTFAVERRWFVLLMTLIATVIGAVSLSRLPIDAVPDITNNQVQINIRAPALSPELV 61

Query: 65   EKFITIPIEIAMNPVQKKTDIRSTTLFGLSVINVMFEDRVDDFTARQQVYNLLNDAD--L 122
            EK +  PIE A+  V      RS +  G + +  +F D  + + ARQQV   L  A+  L
Sbjct: 62   EKQVAFPIETALAGVPGLEHTRSLSRNGFAQVTAVFTDSTNIYFARQQVAERLRTAEESL 121

Query: 123  PEGVTPEVQPLYGPTGEIYRYTLR-------------------------------SDRRS 151
            P G TPE+ P+    GE+Y +T+                                S+   
Sbjct: 122  PAGATPEMGPIATGLGEVYMWTVHMAHRPEDKHKPGEPGIQPDGSYLTPEGERLVSEADK 181

Query: 152  VRDLKTIQDWVIERNLRSVSGVADIVSFGGEVKTFEVSVNPHQLINYGITSLELYDAIAK 211
               L+T QDW++   L+SV G+A + S GG VK F+V  +  +L    ++  +L  A+ +
Sbjct: 182  ATYLRTTQDWIVAPLLKSVPGLAGVDSIGGYVKQFQVVPDVQRLTALKLSLGDLATALEE 241

Query: 212  SNINVGGDVITKSSQAYVVRGIGLINDLDELRNIVVKNINGTPILVKNLADVHESCLPRL 271
            +N  VG   + ++ +   VR    I + D+L   V+    G PIL+  +A V      R+
Sbjct: 242  NNSAVGAGTVDRNGEGLAVRSDARIANADQLGRTVIATREGVPILLNQVATVRTGQAIRM 301

Query: 272  GQVGRMDENDVVQGIVVMRKGENPGEVIANLKDKIEELNQNVLPEDVRIIPFYDREDLVN 331
            G     +  +VV G  +MR GEN   V + +  +++E+N + LP D+ I P  DR  LVN
Sbjct: 302  GSASE-NAQEVVVGTAIMRIGENSRNVASAVATRLDEVNAS-LPTDIVIQPVLDRTGLVN 359

Query: 332  LAVKTVTHNLIEGILLVTFIVLIFMADWRTTVIVAVIIPLALLFAFICLRVMGMSANLLS 391
              +KTV  NL EG LLV  ++ + + ++R  +I A++IP+ +L     +   G+SANL+S
Sbjct: 360  STIKTVAKNLSEGALLVIVVLFLLLGNFRAALIAALVIPVTMLMTSFGMLRGGVSANLMS 419

Query: 392  MGAIDFGIIIDGAVVMVEGVFVALDKKAKEVGMPAFNVMSKMGLIRHTAKDKAKAVFFSK 451
            +GA+DFG+I+DGAV++VE     + ++   +G    +   ++ ++   A++  +   + +
Sbjct: 420  LGALDFGLIVDGAVIIVENALRRIAERQHHIGR-TLDKGERLSVVAGAAREMIRPSVYGQ 478

Query: 452  LIIITALIPIFSFQKVEGKMFSPLAYTLGFALLGALIFTLTLVPVMSSMLLKKNVREKNN 511
             III   +P+ +   VEGK F+P+A T+  AL  A + +LT VP M ++ L K V EK  
Sbjct: 479  AIIILVYVPLLTLTGVEGKTFTPMALTVILALAFAFVLSLTFVPAMLAIWLSKPVEEKEG 538

Query: 512  RFVHFINQKCTALFDTFYAHRKLTIGLATVVAGVGLWL-----FSFLGTEFLPQLNEGSI 566
            R + ++ ++     D   A  ++TI     +AGVG +L     F  LG EFLPQL+EG  
Sbjct: 539  RIMSWLKRRYEPGLDRAMARPRVTI-----LAGVGAFLLAILAFMTLGQEFLPQLDEGDA 593

Query: 567  YIRATLPQSISLDESVTLANKMRKKLLTFPEVRQVLSQTGRPNDGTDATGFYNIEFHVDI 626
             ++       S+++S  +  ++ K + + PEV+ V S+TG     +D       +  V +
Sbjct: 594  TVQVLRVPGTSVEQSQAMQFQVEKAISSIPEVKFVFSKTGTAELASDPMPPNISDTFVIM 653

Query: 627  YPEKDW-ESKLTKLQLIDKMQEDLSIYPGIDFNFSQPITDNVEEAASGVKGSIAVKVFGK 685
                DW +  LTK +++ K+++ L   PG  F  SQPI     E  +GV+G IAVKVFG 
Sbjct: 654  KKHADWPDPSLTKAEVVAKIEKALEGLPGNAFEISQPIQMRFNELIAGVRGDIAVKVFGD 713

Query: 686  DLYESEKLAVQIDKILNTVQGIEDLGVIRNIGQPELRIELNERQLARYGVAKEDVQSIIE 745
            D       A +I  IL  V G  D+ V +  G P L I  N   +AR G+    +Q  + 
Sbjct: 714  DTDAMNDTANKIAGILRGVDGATDVRVEQTEGLPMLDIRPNRDAMARLGITARVMQDTVA 773

Query: 746  MAIGGKSASLLYEDERKFNIMVRYSEEFRQNEEEIGKILVPAMDGTMVPIKELADITTIT 805
             AIGG+ A +++E +R+F + +R ++  R + + +G++ VP  DG  VP++ +ADI   +
Sbjct: 774  AAIGGRDAGMIFEGDRRFAVTIRLTDAARADLQTLGQVPVPTPDGAFVPLESVADIAVTS 833

Query: 806  GPLLIFRDNHARFCAVKFSVRGRDMGTAVAEAQKKVNASVHLPAGYSLKWTGDFENQQRA 865
            GP  I R+N  R   V+ +VRGRD+   V +A+  +   V LPAG  L+W G FEN Q A
Sbjct: 834  GPNQISRENGKRRVVVQANVRGRDVAGVVEDARAAIARDVRLPAGQYLEWGGQFENLQSA 893

Query: 866  SKRLAQVVPISIAIIFIILFILFSNARDAGLVLLNVPFAAVGGIAALLITGFNFSISAGI 925
            S RL  VVP   A+I ++L+    + RDA +V   VP A VGG+ AL + G  FSISA +
Sbjct: 894  SARLMLVVPACFALIILLLYGALGSVRDAAIVFTGVPLALVGGVLALFLRGMPFSISAAV 953

Query: 926  GFIALFGICIQNGVIMISDIKANLKLGSPLQEATKEGVRSRIRPVIMTAAMAAIGLLPAA 985
            GFIAL GI + NG++M++ I+  +  G    EA  +G  +R+RPV+MTA +A++G +P A
Sbjct: 954  GFIALSGIAVLNGLVMVTSIQDLMARGVSRAEAAYQGALARLRPVVMTALVASLGFVPMA 1013

Query: 986  MSHGIGSESQRPLAIVIIGGLIGATFFALFIFPLI 1020
            ++ G G+E Q+PLA V+IGGLI AT   LF+ P +
Sbjct: 1014 IATGSGAEVQKPLATVVIGGLISATLLTLFVLPTL 1048