Pairwise Alignments

Query, 1035 a.a., putative cation efflux system (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1042 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  316 bits (809), Expect = 6e-90
 Identities = 249/1039 (23%), Positives = 477/1039 (45%), Gaps = 58/1039 (5%)

Query: 6    IQRPIAVLMAFTACFIIGLVTYSTLPISLLPNIAIPEITVQVASANTSARELENTIVKPL 65
            ++RP+   +        GLV++  LP+   PNI  P ++VQ      SA  +E+ I + +
Sbjct: 8    VKRPVFASVISMLLIAFGLVSFDKLPLREYPNIDPPIVSVQTNYRGASAAVVESRITQLV 67

Query: 66   RGQLIQVSTLKDIHSESRDGAGIIRLSFEYGTNTDLAFIEVNEKIDAAMNYLPKEAERPK 125
              ++  V  +++I+S S DG   + L F+ G + + A  +V ++I   +N LP+EA+ P+
Sbjct: 68   EDRISGVEGIRNINSSSSDGRSSVTLEFDVGRDIEAAANDVRDRISGLLNNLPEEADPPE 127

Query: 126  VIKASATDIPVFYLNLTLKNDSAYGATEQHSFLELCEFAESVIKRRIEQLEEVAMVDVTG 185
            V KA+  D  + +LNL          ++Q + L+L ++A   +  R   ++ VA + + G
Sbjct: 128  VQKANGGDEVIMWLNLV---------SDQMNTLQLTDYARRYLVDRFSVIDGVANIRIGG 178

Query: 186  ILERQVQIVPDKDKLAMMGLSIGDIESALSSNNVEPGSMTVRDGYYEYNIKFSTLLRTAE 245
                 +++  D+  LA   L++ DIES L S NVE  + +V      + ++     +TAE
Sbjct: 179  GKVYAMRVWIDRQALAARNLTVSDIESVLRSENVELPAGSVESQDRHFTVRLERTFKTAE 238

Query: 246  DVENIYLRKGDR--IVQLKDFCKVSVVPVKEKGVSLSNGKRAVSLAVIKQADENMDKMKQ 303
            D  N+ L +G+   +++L D  +V +   +E+     N +  + L + KQ+  N  ++ +
Sbjct: 239  DFNNLVLAEGEDGYLIKLGDVARVEIGSEEERITFRGNREAMIGLGISKQSTSNTLEVAR 298

Query: 304  ALVGTMTYFQLVYPE-IDFSISRNQTELLDYTISNLQQNLSLGFLFICLVAVLFLGDVKS 362
            A    +       P  ++   S + +  ++ +I  + Q L +    + +V  LFLG V++
Sbjct: 299  AANALVDKINPTLPAGMEIKRSYDSSVFIEASIKEVYQTLFIAMFLVIVVIYLFLGSVRA 358

Query: 363  PLVIGLSMVVSIVISFVFFYLCNMSLNIISLAGLILALGMMIDSSIIVTENISQYRERGY 422
             L+  L++ VS++ +F+  Y    ++N+++L  +ILA+GM++D +I+V ENI +  E G 
Sbjct: 359  MLIPALTVPVSLMATFIVLYALGYTINLLTLLAMILAIGMVVDDAIVVLENIHRRIEEGD 418

Query: 423  SLRRACVTGTSEVVTPMLSSSLTTIAVFAPLIFMSGIAGAIFFDQAFSVTVGLMVSYLTG 482
            S  +A   G+ EV   +++++L  +AVF P+ F+ G  G +F + A +++  ++ S L  
Sbjct: 419  SPLKAAYLGSREVAFAVVATTLVLVAVFMPITFLEGDLGKLFKEFAVAMSAAVIFSSLVA 478

Query: 483  IMLLPVLYLLVYRTGVRTRKWKWLSFKFNNPIKDHTLDRFYDAGVDWVFRHKTFSVLFCV 542
            + L P++   + +   +     WL  K +  +  + L   Y A +     H        V
Sbjct: 479  LTLSPMMCSKLLKPAGQD---PWLVRKIDAGM--NWLSAGYRATLKRAMIHPFIVSSLVV 533

Query: 543  ISIPLCVFFFFFIDKERMPDIEENELIARIEWNENIHVDENKRRVDELFKELKDEVLEQT 602
            I++ L  +    + +E  P  +   +   +   +    +     +DE+   L    L  +
Sbjct: 534  IALGLSGYLMTKVPQEFAPQEDRGSMFLIVNGPQGASFEYISPYMDEIENRLMP--LVDS 591

Query: 603  ASIGRQDFILNRERELSSSEAELYFRTETSNAIASLEQAVYRKL------KERYPLSVIS 656
              I R   ++   R    S            AI  LE    R+         R  LS ++
Sbjct: 592  GDIKR--LLIRAPRGFGRSA-----NFSNGMAIIVLEDWADRRSAFEIIGDIRARLSDLA 644

Query: 657  FSPPETVFEKLFVTGEPDVVAEFYTRNKAEAPKAEAIRSVEQELGRKTGINPTGIAFEN- 715
                  V  + F  G    V     +     P  E +      L  K   NP  +  ++ 
Sbjct: 645  GVRAFPVMRQAFGRGVGKPV-----QFVLGGPSYEELAKWRDILLEKAKENPNLVGLDHD 699

Query: 716  ------QLNLSISKEKLLLYRVSYNELYRVLKTAFRENSVTMLHSYQQYLPINIAGDEKT 769
                  QL + I K++     VS + + R L++      VT      +   + I G+   
Sbjct: 700  YQETKPQLRVVIDKDRAADLGVSISHIGRTLESMLGSRLVTTFMRDGEEYDVIIEGNRDN 759

Query: 770  VNEVLQETLVQTQPDNRGNVDFIPLRELINVAPAEDLKSITSGRNGEYVPF-----DFYG 824
             N     + +  + D   + + IPL  L++V    D   +        +       D Y 
Sbjct: 760  QNTASDLSNIYVRSDR--SRELIPLANLVSVEEFADASQLNRYNRMRAITIEANLADGYS 817

Query: 825  VQDANRLMREVKQV---AEETGDWDTGFSGSIFSNKEMLDELVVILLISLLLMYFILAAQ 881
            + +A   +  +      AE        + G     +E    +  + L++L +++ +LAAQ
Sbjct: 818  LGEALDYLNNLAYTYLPAEAV----ISYKGQSLDYQESGSSMYFVFLLALGIVFLVLAAQ 873

Query: 882  FESFLQPLLVLAEIPIDVAFALLLLWICGHTLNLMSAIGLIVTCGIVINDSILKLDAINE 941
            FES++ P++++  +P+    AL+ LW+ G +LN+ S IG+I+  G+   + IL ++  N+
Sbjct: 874  FESYIHPMVIMLTVPLATLGALIGLWVTGQSLNIYSQIGIIMLVGLAAKNGILIVEFANQ 933

Query: 942  LRKAGVPLLEAIHEAGRRRLRPIIMTSLTTIFAMVPLLFSSDMGSELQKPLSIAMIGTMS 1001
            LR  G+    AI +A  +RLRPI+MT +TT    +PL+ +   G+E +  + + ++  + 
Sbjct: 934  LRDKGIEFDTAIIQAASQRLRPILMTGITTAAGAIPLVLAQGAGAETRFVIGVVVLSGII 993

Query: 1002 IGTAVSLFIIPLLYWFIYR 1020
            + T  +L +IP+ Y  I R
Sbjct: 994  LATFFTLLVIPVAYGLIAR 1012