Pairwise Alignments

Query, 1035 a.a., putative cation efflux system (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1042 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  308 bits (789), Expect = 1e-87
 Identities = 258/1046 (24%), Positives = 477/1046 (45%), Gaps = 78/1046 (7%)

Query: 6    IQRPIAVLMAFTACFIIGLVTYSTLPISLLPNIAIPEITVQVASANTSARELENTIVKPL 65
            ++RP+  L+      + GLV++S L +  +P++  P +TV  + +  SA  +E+ I   L
Sbjct: 8    VKRPVVALVLSLLLCVFGLVSFSKLAVREMPDVESPVVTVMTSYSGASASIMESQITTVL 67

Query: 66   RGQLIQVSTLKDIHSESRDGAGIIRLSFEYGTNTDLAFIEVNEKIDAAMNYLPKEAERPK 125
              +L  +S + +I S +R+G   I +SF+   N      +V + +  A   LP EA+ P 
Sbjct: 68   EDELTGISGIDEITSVTRNGMSRITISFDLDWNLTEGVSDVRDAVARAQRRLPDEADEPI 127

Query: 126  VIKASATDIPVFYLNLTLKNDSAYGATEQHSFLELCEFAESVIKRRIEQLEEVAMVDVTG 185
            V K + +  P  Y+NL+    S    T+      L ++A+ V++ R   +  V+ V+++G
Sbjct: 128  VSKDNGSGEPSVYINLS---SSTMDRTQ------LTDYAQRVLEDRFSLITGVSSVNISG 178

Query: 186  ILERQVQIVPDKDKLAMMGLSIGDIESALSSNNVEPGSMTVRDGYYEYNIKFSTLLRTAE 245
             L + + +  D   +A  G++  DI  AL S NVE     VR+      ++ + L    E
Sbjct: 179  GLYKVMYVQLDPKLMAGRGVTTTDITDALRSENVESPGGEVRNDTTVMTVRTARLYLHPE 238

Query: 246  DVENIYLRKGD--RIVQLKDFCKVSVVPVKEKGVSLSNGKRAVSLAVIKQADENMDKMKQ 303
            D + + +R       + LKD  +V +    E     S+G   +SL ++ Q+D N  ++ Q
Sbjct: 239  DFDYLVVRTASDGSPIYLKDVARVFIGAENENSTFKSDGVPNLSLGIVAQSDANPLQVAQ 298

Query: 304  ALVGTMTYFQLVYPE-IDFSISRNQTELLDYTISNLQQNLSLGFLFICLVAVLFLGDVKS 362
             +   +   Q   PE    S+  + T  +D +I  +   L +    + LV  LF+G  ++
Sbjct: 299  RVREEVDKLQKFLPEGTQLSVDYDSTVFIDQSIGEVYNTLYITGALVVLVLYLFIGQARA 358

Query: 363  PLVIGLSMVVSIVISFVFFYLCNMSLNIISLAGLILALGMMIDSSIIVTENISQYRERGY 422
             L+  +++ VS++ +F+       S+N+++L  LILA+G+++D +I+V ENI  + ERG 
Sbjct: 359  TLIPAVTVPVSLISAFIAANYLGYSINLLTLMALILAIGLVVDDAIVVVENIFHHIERGE 418

Query: 423  SLRRACVTGTSEVVTPMLSSSLTTIAVFAPLIFMSGIAGAIFFDQAFSVTVGLMVSYLTG 482
                A   G  EV   +++++   + VF P+ FM G+ G +F + A  + + ++ S +  
Sbjct: 419  PAILAAYKGAREVGFAVVATTAVLVMVFLPISFMDGMVGRLFTEFAVMLAMAVIFSSVIA 478

Query: 483  IMLLPVLYLLVYRTGVRTRKWKWLSFKFNNPIKD--HTLDRFYDAGVDWVFRHKTFSVLF 540
            + L PVL       G +  K K      N  +      L+ +Y   V W  R++  + + 
Sbjct: 479  LTLTPVL-------GSKLLKRKHRPKALNRLMDSGFARLEAWYRRAVAWAVRYRLAAPVV 531

Query: 541  CVISIPLCVFFFFFIDKERMPDIEENELIARIEWNENI---HVDENKRRVDELFKELKDE 597
             V  +         +  +  P  +   + A ++  E      +  N   V++    L  +
Sbjct: 532  IVACVIGSGLLMNQVPAQLAPQEDRGVIFAFVKGAEGTSYNRMTSNMDIVEQRLMPLLSQ 591

Query: 598  VLEQTASIGRQDFILNRERELSSSEAELYFRTETSNAIASLEQAVYRKLKERYPLSVISF 657
             + ++ S+    F            A      +T   I  LE    R +  +  L+V++ 
Sbjct: 592  GVIKSFSVQAPAF---------GGRA----GDQTGFVIMQLEDWQARDINAQQALAVVAK 638

Query: 658  SPPETVFEKLFVTGEPDVVAEFYT---RNKAEAPK---------------AEAIRSVEQE 699
            +          + G PDV+        R K+  P                A  ++++   
Sbjct: 639  A----------LKGIPDVMVRPMLPGFRGKSSEPVQFVLGGSDYDELFKWASKLKAIADA 688

Query: 700  LGRKTGINPTGIAFENQLNLSISKEKLLLYRVSYNELYRVLKTAFRENSVTMLHSYQQYL 759
                TG +        +L +S+ +++     +S  ++ + L+      S T      +  
Sbjct: 689  SPIVTGADLDYAETTPELVVSVDRQRAAELGISVAQVSQTLEVMLGGRSETSFIERGEEY 748

Query: 760  PINIAGDEKTVNEVLQETLVQTQPDNRGNVDFIPLRELINVAPAEDL------KSITSGR 813
             + + G E++ N +   + +  +  N   +    +  +  VA A  L      KSIT   
Sbjct: 749  DVYLRGKEESFNSMADLSQIYMRAANGELITLDAITHIEEVASAHKLSHTNKQKSITLKA 808

Query: 814  N-GEYVPFDFYGVQDANRLMREVKQVAEETGDWDTGFSGSIFSNKEMLDELVVILLISLL 872
            N GE      Y + +A   + + K +    GD    ++G     KE    ++++  ++LL
Sbjct: 809  NLGE-----GYTLGEALDFL-DAKAIEILPGDISISYTGESKEFKENQSSVMLVFALALL 862

Query: 873  LMYFILAAQFESFLQPLLVLAEIPIDVAFALLLLWICGHTLNLMSAIGLIVTCGIVINDS 932
            + Y +LAAQFESF+ PL+V+  +P+ +    + L++ G  LN+ S IG+I+  G+V  + 
Sbjct: 863  VAYLVLAAQFESFINPLVVMLTVPMGIFGGFIGLYLMGLGLNIYSQIGMIMLIGMVTKNG 922

Query: 933  ILKLDAINELRKAGVPLLEAIHEAGRRRLRPIIMTSLTTIFAMVPLLFSSDMGSELQKPL 992
            IL ++  N+LR  G  L +AI +A  RRLRPI+MT+ TT+   VPL+ SS  GSE +  +
Sbjct: 923  ILIVEFANQLRDRGASLEQAILDASARRLRPILMTAFTTLVGAVPLILSSGAGSESRIAV 982

Query: 993  SIAMIGTMSIGTAVSLFIIPLLYWFI 1018
               +   M+  T V+L +IP +Y  I
Sbjct: 983  GTVVFFGMAFATLVTLLVIPAMYRLI 1008