Pairwise Alignments

Query, 194 a.a., Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 232 a.a., electron transport complex subunit RsxE from Klebsiella michiganensis M5al

 Score =  172 bits (435), Expect = 5e-48
 Identities = 88/196 (44%), Positives = 125/196 (63%), Gaps = 14/196 (7%)

Query: 6   VMMNGIIKENPIFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISSIKNLIPDM 65
           V++ G+ K N   V LLGMCP L  TS+A N +G+GLAT  VL  +N+ ISS++   P  
Sbjct: 7   VIVQGLWKNNSALVQLLGMCPLLAVTSTATNALGLGLATTLVLTLTNLTISSLRRWTPAE 66

Query: 66  VRIPSFIVVIASFVTLLQMIMQAYVPDLYATLGLFIPLIVVNCIVLGRAEAFAAKNNPLA 125
           +RIP ++++IAS V+++QM++ AY   LY +LG+FIPLIV NCIV+GRAEAFAAK  P  
Sbjct: 67  IRIPIYVMIIASVVSVVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPAL 126

Query: 126 SMFDGIGMGFGFTIALTLLGAVREFLGTG--------------KIFNLTILPEEYGMLIF 171
           S  DG  +G G T A+ +LG++RE LG G              K+  + +   +   L+ 
Sbjct: 127 SALDGFSIGMGATCAMFVLGSMREILGNGTLFDGADSLLGGWAKVLRIEVFHTDTPFLLA 186

Query: 172 VLAPGAFIALGYLIAI 187
           +L PGAFI LG ++A+
Sbjct: 187 MLPPGAFIGLGMMLAV 202