Pairwise Alignments

Query, 367 a.a., putative ABC transporter ATP-binding protein or permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 379 a.a., ABC-type multidrug transport system, permease component from Sphingomonas koreensis DSMZ 15582

 Score =  195 bits (495), Expect = 2e-54
 Identities = 119/370 (32%), Positives = 209/370 (56%), Gaps = 12/370 (3%)

Query: 6   AFVKKEFYHIFRDRRTMLILLGMPVVQIILFGFAISTEVKNVRLAVLDPSNDVVTRKIID 65
           A + KE + + RD  T  +++G+P+VQ+ILFGFAI+ + +++R A+    +  +TR + +
Sbjct: 14  AVLVKEVHQLRRDPLTFGMVVGLPLVQLILFGFAINNDPRHLRAALEMNDHSSITRTVEN 73

Query: 66  RLDASEYFTVTTRFHSPQEMETAFRKNKIDMAIVFGERFADGLYTGDARVQLIV--DATD 123
            L AS YF +      P E E   R+  +   IV    F   L  G+ R QL+V  DATD
Sbjct: 74  SLRASSYFELVP-VSKPGEGEAMLRRGSVQFLIVVPSNFTRDLVRGE-RPQLLVLADATD 131

Query: 124 PNMSTSQSNYAA--SIVSSAGQEMLPPNVFVSRLTPDVKLL----YNPQMKSAYNFVPGV 177
           P  +T  + +A   +++S    +++ P    +     V+++    YNP+  +++N VPG+
Sbjct: 132 P-AATGNATFAVEQAVLSGLRHDLIGPLTARAGTPSPVEVVIQRRYNPEGITSHNIVPGL 190

Query: 178 MGLILMLICAMMTSISIVREKETGTMEVLLVSPVRPLFIVLAKAVPYFVLSFVNLTTILL 237
           + ++L +   MMTSI++ RE+E GTME LL  P+RP+ ++  K +PY ++       I++
Sbjct: 191 LAVVLSMTMVMMTSIAVARERERGTMENLLAMPLRPMEVMTGKILPYVLIGAAQTVIIVV 250

Query: 238 LSVFVLDVPVVGSLFWLVMVSLLFIFVSLALGLLISSVTSTQVAAMLASGMILMMPTMVL 297
           L+  +  VP  G+ + L + +L+FI VSL LG  +S+   TQ+ AM  S    ++P+++L
Sbjct: 251 LAGLIFHVPFAGAAWLLALATLVFITVSLLLGFTLSTFAKTQMQAMQMS-FFYILPSILL 309

Query: 298 SGMIFPVESMPVILRAISDIIPARWYIQAVRKLMIEGVPVVLVLKEIGILLLMAVVLITI 357
           SG  FP   MP   + + +++P   Y++ VR +M++G      L ++ IL  +  V   I
Sbjct: 310 SGFAFPYAGMPRWAQWLGELLPVTHYLRVVRGVMLKGWYPGEALTQLLILAALGAVFAVI 369

Query: 358 SIRKFKYRLE 367
           ++R++   LE
Sbjct: 370 AVRRYGDTLE 379