Pairwise Alignments

Query, 367 a.a., putative ABC transporter ATP-binding protein or permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 371 a.a., ABC-type multidrug transport system, permease component from Sphingomonas koreensis DSMZ 15582

 Score =  160 bits (405), Expect = 5e-44
 Identities = 104/349 (29%), Positives = 183/349 (52%), Gaps = 5/349 (1%)

Query: 8   VKKEFYHIFRDRRTMLILLGMPVVQIILFGFAISTEVKNVRLAVLDPSNDVVTRKIIDRL 67
           + KE   + RD   + +L+   ++Q+ILF FA + +V++  + +L+      + +I+ R+
Sbjct: 9   IVKELQALTRDPAAVRLLIMPVILQVILFPFAATLDVRDASIGILNQDGGKASTEIVQRI 68

Query: 68  DASEYFTVTTRFHSPQEMETAFRKNKIDMAIVFGERFADGLYTGDAR-VQLIVDATDPNM 126
            A+E F       S  E+  A  + ++ +A+ F   F+  L  GDA  VQ+I D    N 
Sbjct: 69  AAAEAFGEVRILTSDDELRDALNRQQVLLAVRFLPSFSRDLARGDAASVQVIGDGRRSNS 128

Query: 127 STSQSNYAASIVSSAGQEML-PPNVFVSRLTPDV--KLLYNPQMKSAYNFVPGVMGLILM 183
           +     Y   IV   G E+   P    S  + +V  +  YNP ++  ++ V  ++ ++  
Sbjct: 129 AQLAQGYVDQIVRGYGAEISGDPRSRGSFGSAEVVTRNWYNPNLEGRWSIVTSLVAIMTT 188

Query: 184 LICAMMTSISIVREKETGTMEVLLVSPVRPLFIVLAKAVPYFVLSFVNLTTILLLSVFVL 243
           L   + T++S+ RE+E GT++ +LVSP+ P  I+L K +P  ++     T I+L+++F+ 
Sbjct: 189 LGVLITTALSVAREREQGTLDQILVSPLSPALIMLGKTIPAVMIGTFQATIIVLVAIFIF 248

Query: 244 DVPVVGSLFWLVMVSLLFIFVSLALGLLISSVTSTQVAAMLASGMILMMPTMVLSGMIFP 303
            VP  GSL  L    LL+       GL IS+++ TQ  A L      MMP ++LSG I P
Sbjct: 249 GVPFTGSLLVLYTGMLLYALALCGFGLFISAISETQQQAFLGV-FTFMMPAILLSGFIAP 307

Query: 304 VESMPVILRAISDIIPARWYIQAVRKLMIEGVPVVLVLKEIGILLLMAV 352
           V +MP+ L+ +S I P R +I  V+ + ++G   V +   +  + ++AV
Sbjct: 308 VANMPLWLQWVSWIDPLRHFIVIVKGVFLKGSGFVEIWSSLWPIAVIAV 356